[INFO] crate wham 0.9.4 is already in cache [INFO] testing wham-0.9.4 against beta-2019-09-28 for beta-1.39-1 [INFO] extracting crate wham 0.9.4 into work/builds/worker-2/source [INFO] validating manifest of crates.io crate wham 0.9.4 on toolchain beta-2019-09-28 [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate wham 0.9.4 [INFO] finished tweaking crates.io crate wham 0.9.4 [INFO] tweaked toml for crates.io crate wham 0.9.4 written to work/builds/worker-2/source/Cargo.toml [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "build" "--frozen"` [INFO] [stdout] 6cbea78765c01d4a80d686a3349ea0e979d8e9bed3f5a2eb000c2b6b0ae9c63e [INFO] running `"docker" "start" "-a" "6cbea78765c01d4a80d686a3349ea0e979d8e9bed3f5a2eb000c2b6b0ae9c63e"` [INFO] [stderr] Compiling GSL v1.1.0 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling wham v0.9.4 (/opt/rustwide/workdir) [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:218:2 [INFO] [stderr] | [INFO] [stderr] 218 | writeln!(lock, "# PMF"); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:219:2 [INFO] [stderr] | [INFO] [stderr] 219 | writeln!(lock, "#bin\t\tFree Energy\t\t+/-\t\tP(x)\t\t+/-"); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:221:3 [INFO] [stderr] | [INFO] [stderr] 221 | writeln!(lock, "{:9.5}\t{:9.5}\t{:9.5}\t{:9.5}\t{:9.5}", bin, A[bin], A_std[bin], P[bin], P_std[bin]); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:223:2 [INFO] [stderr] | [INFO] [stderr] 223 | writeln!(lock, "# Bias offsets"); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:224:2 [INFO] [stderr] | [INFO] [stderr] 224 | writeln!(lock, "#Window\t\tF\t\tF_prev"); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:226:3 [INFO] [stderr] | [INFO] [stderr] 226 | writeln!(lock, "{}\t{:9.5}\t{:8.8}", window, F[window], (F[window]-F_prev[window]).abs()); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/io.rs:184:5 [INFO] [stderr] | [INFO] [stderr] 184 | writeln!(buf, "#{} {} {} {} {}", header, "Free Energy", "+/-", "Probability", "+/-"); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.0.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.1.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.10.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.11.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.12.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.13.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.14.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.15.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.2.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.3.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.4.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.5.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.6.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.7.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.8.rcgu.o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.wham.4k5xj3n7-cgu.9.rcgu.o" "-o" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d" "/opt/rustwide/target/debug/deps/wham-cfadfef16be85c3d.2fl4nn73yyoxytw5.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/target/debug/build/backtrace-sys-f66bd34361c58f86/out" "-L" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/libclap-8de65fd62125778a.rlib" "/opt/rustwide/target/debug/deps/libyaml_rust-b0070dd56b05e81e.rlib" "/opt/rustwide/target/debug/deps/libvec_map-1d07ce46f780a1ae.rlib" "/opt/rustwide/target/debug/deps/libtextwrap-1f2d63b65184cfac.rlib" "/opt/rustwide/target/debug/deps/libunicode_width-b9c8816a90102d04.rlib" "/opt/rustwide/target/debug/deps/libstrsim-ec36f8fc183413c4.rlib" "/opt/rustwide/target/debug/deps/libbitflags-4961bb5087b14aca.rlib" "/opt/rustwide/target/debug/deps/libatty-03b8a93222186773.rlib" "/opt/rustwide/target/debug/deps/libansi_term-d783327a58311329.rlib" "/opt/rustwide/target/debug/deps/libwham-fab8fbca1d05a783.rlib" "/opt/rustwide/target/debug/deps/librayon-50f13a736df720a0.rlib" "/opt/rustwide/target/debug/deps/librayon_core-c49cf67e7e01c9e7.rlib" "/opt/rustwide/target/debug/deps/libnum_cpus-1c28d23b93f67e46.rlib" "/opt/rustwide/target/debug/deps/libcrossbeam_queue-91a20af24e36b7fc.rlib" "/opt/rustwide/target/debug/deps/libeither-a375c15081516f4e.rlib" "/opt/rustwide/target/debug/deps/libcrossbeam_deque-88cb24a4320751bb.rlib" "/opt/rustwide/target/debug/deps/libcrossbeam_epoch-b354611e19ca8b0a.rlib" "/opt/rustwide/target/debug/deps/libscopeguard-4c52de923eb3c35b.rlib" "/opt/rustwide/target/debug/deps/libmemoffset-0a15f9717a13ff60.rlib" "/opt/rustwide/target/debug/deps/libcrossbeam_utils-b01e92d2daf9a708.rlib" "/opt/rustwide/target/debug/deps/liblazy_static-955d54352a795d1f.rlib" "/opt/rustwide/target/debug/deps/libarrayvec-d208b7397580726a.rlib" "/opt/rustwide/target/debug/deps/libnodrop-2429cd2ceac458fc.rlib" "/opt/rustwide/target/debug/deps/librgsl-8a289a7749dc524a.rlib" "/opt/rustwide/target/debug/deps/libc_vec-6840fb8c706e6ba8.rlib" "/opt/rustwide/target/debug/deps/librand-2d809f82e1afeef8.rlib" "/opt/rustwide/target/debug/deps/librand_core-6f7334854ba6f48e.rlib" "/opt/rustwide/target/debug/deps/librand_core-4aa3cc91f7697a4f.rlib" "/opt/rustwide/target/debug/deps/liberror_chain-e8349edb94429f5d.rlib" "/opt/rustwide/target/debug/deps/libbacktrace-07c858d204cd0094.rlib" "/opt/rustwide/target/debug/deps/libbacktrace_sys-6c3c00b5933b3a63.rlib" "/opt/rustwide/target/debug/deps/liblibc-9f7a5de25bd5699b.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-1e2186a891f602d1.rlib" "/opt/rustwide/target/debug/deps/librustc_demangle-8305082ed3b64c26.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-db812c66f862af4c.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-e7871a21575d5ff7.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-2f2c581bc0d759e6.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-35731cabc05dc8a0.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-36477394541292db.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-8b706b170c1272d8.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-801dbb3043ccf581.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-a32aa66ce6f72b21.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-d00ea3bfb2bb6c00.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-d2c6ebe88c3e113c.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-df74f62f6bb60621.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-2170473575daeedb.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-1a08089bbddc4f51.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-f8f562e5472ad5c3.rlib" "-Wl,-Bdynamic" "-lutil" "-lutil" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /opt/rustwide/target/debug/deps/librgsl-8a289a7749dc524a.rlib(rgsl-8a289a7749dc524a.rgsl.dye7ygm4-cgu.8.rcgu.o): In function `rgsl::statistics::sd': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/GSL-1.1.0/src/statistics.rs:85: undefined reference to `gsl_stats_sd' [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `wham`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "6cbea78765c01d4a80d686a3349ea0e979d8e9bed3f5a2eb000c2b6b0ae9c63e"` [INFO] running `"docker" "rm" "-f" "6cbea78765c01d4a80d686a3349ea0e979d8e9bed3f5a2eb000c2b6b0ae9c63e"` [INFO] [stdout] 6cbea78765c01d4a80d686a3349ea0e979d8e9bed3f5a2eb000c2b6b0ae9c63e