[INFO] crate needletail 0.2.2 is already in cache [INFO] testing needletail-0.2.2 against beta-2019-09-28 for beta-1.39-1 [INFO] extracting crate needletail 0.2.2 into work/builds/worker-9/source [INFO] validating manifest of crates.io crate needletail 0.2.2 on toolchain beta-2019-09-28 [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate needletail 0.2.2 [INFO] finished tweaking crates.io crate needletail 0.2.2 [INFO] tweaked toml for crates.io crate needletail 0.2.2 written to work/builds/worker-9/source/Cargo.toml [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "build" "--frozen"` [INFO] [stdout] d8fb7ac96449152355cc4bbb00168dc4e82bbaf97d773ad34bf03971dcd9973e [INFO] running `"docker" "start" "-a" "d8fb7ac96449152355cc4bbb00168dc4e82bbaf97d773ad34bf03971dcd9973e"` [INFO] [stderr] Compiling lzma-sys v0.1.15 [INFO] [stderr] Compiling zip v0.4.2 [INFO] [stderr] Compiling xz2 v0.1.6 [INFO] [stderr] Compiling needletail v0.2.2 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/fastx.rs:299:59 [INFO] [stderr] | [INFO] [stderr] 299 | fastx_reader(&mut cursor, None, callback, None::<&mut FnMut(&'static str) -> ()>) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn FnMut(&'static str) -> ()` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:8:19 [INFO] [stderr] | [INFO] [stderr] 8 | file: &'a mut io::Read, [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:23:30 [INFO] [stderr] | [INFO] [stderr] 23 | pub fn new(file: &'a mut io::Read, buf_size: usize, header: &[u8]) -> Result, ParseError> { [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/util.rs:34:32 [INFO] [stderr] | [INFO] [stderr] 34 | fn cause(&self) -> Option<&error::Error> { [INFO] [stderr] | ^^^^^^^^^^^^ help: use `dyn`: `dyn error::Error` [INFO] [stderr] [INFO] [stderr] warning: method is never used: `from_bytes` [INFO] [stderr] --> src/buffer.rs:85:5 [INFO] [stderr] | [INFO] [stderr] 85 | pub fn from_bytes(data: &'a [u8]) -> Self { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2.37s [INFO] running `"docker" "inspect" "d8fb7ac96449152355cc4bbb00168dc4e82bbaf97d773ad34bf03971dcd9973e"` [INFO] running `"docker" "rm" "-f" "d8fb7ac96449152355cc4bbb00168dc4e82bbaf97d773ad34bf03971dcd9973e"` [INFO] [stdout] d8fb7ac96449152355cc4bbb00168dc4e82bbaf97d773ad34bf03971dcd9973e [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen" "--no-run"` [INFO] [stdout] 7b2f4064be26e581a770cc58132a8e98e424cd86bae3ec2979c21050b7ededb8 [INFO] running `"docker" "start" "-a" "7b2f4064be26e581a770cc58132a8e98e424cd86bae3ec2979c21050b7ededb8"` [INFO] [stderr] Compiling needletail v0.2.2 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/fastx.rs:299:59 [INFO] [stderr] | [INFO] [stderr] 299 | fastx_reader(&mut cursor, None, callback, None::<&mut FnMut(&'static str) -> ()>) [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn FnMut(&'static str) -> ()` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:8:19 [INFO] [stderr] | [INFO] [stderr] 8 | file: &'a mut io::Read, [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/buffer.rs:23:30 [INFO] [stderr] | [INFO] [stderr] 23 | pub fn new(file: &'a mut io::Read, buf_size: usize, header: &[u8]) -> Result, ParseError> { [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn io::Read` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/util.rs:34:32 [INFO] [stderr] | [INFO] [stderr] 34 | fn cause(&self) -> Option<&error::Error> { [INFO] [stderr] | ^^^^^^^^^^^^ help: use `dyn`: `dyn error::Error` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `s` [INFO] [stderr] --> src/fastx.rs:698:13 [INFO] [stderr] | [INFO] [stderr] 698 | for s in rec_buffer.by_ref() { [INFO] [stderr] | ^ help: consider prefixing with an underscore: `_s` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.94s [INFO] running `"docker" "inspect" "7b2f4064be26e581a770cc58132a8e98e424cd86bae3ec2979c21050b7ededb8"` [INFO] running `"docker" "rm" "-f" "7b2f4064be26e581a770cc58132a8e98e424cd86bae3ec2979c21050b7ededb8"` [INFO] [stdout] 7b2f4064be26e581a770cc58132a8e98e424cd86bae3ec2979c21050b7ededb8 [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen"` [INFO] [stdout] f01309710526f8c3f88f1744b9857b5129cf8c247ccf0d653059162bd10a316e [INFO] running `"docker" "start" "-a" "f01309710526f8c3f88f1744b9857b5129cf8c247ccf0d653059162bd10a316e"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/needletail-eb3223482680b04d [INFO] [stdout] [INFO] [stdout] running 24 tests [INFO] [stdout] test bitkmer::test_iterator ... ok [INFO] [stdout] test bitkmer::test_bytes_to_bitkmer ... ok [INFO] [stdout] test bitkmer::test_minimizer ... ok [INFO] [stdout] test bitkmer::can_kmerize ... ok [INFO] [stdout] test bitkmer::test_bitmer_to_bytes ... ok [INFO] [stdout] test fastx::test_buffer ... ok [INFO] [stdout] test fastx::test_fastq_across_buffer ... ok [INFO] [stdout] test fastx::test_empty_records ... ok [INFO] [stdout] test kmer::can_canonicalize ... ok [INFO] [stdout] test bitkmer::test_reverse_complement ... ok [INFO] [stdout] test fastx::test_fastq ... ok [INFO] [stdout] test fastx::test_premature_endings ... ok [INFO] [stdout] test kmer::can_detect_no_n ... ok [INFO] [stdout] test kmer::can_minimize ... ok [INFO] [stdout] test kmer::test_complement ... ok [INFO] [stdout] test fastx::test_wrapped_fasta ... ok [INFO] [stdout] test util::test_memchr_both ... ok [INFO] [stdout] test seq::can_kmerize ... ok [INFO] [stdout] test kmer::test_normalize ... ok [INFO] [stdout] test seq::test_quality_mask ... ok [INFO] [stdout] test seq::can_canonicalize ... ok [INFO] [stdout] test buffer::test_from_bytes ... ok [INFO] [stdout] test fastx::test_callback ... ok [INFO] [stdout] test fastx::test_compressed ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 24 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests needletail [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "f01309710526f8c3f88f1744b9857b5129cf8c247ccf0d653059162bd10a316e"` [INFO] running `"docker" "rm" "-f" "f01309710526f8c3f88f1744b9857b5129cf8c247ccf0d653059162bd10a316e"` [INFO] [stdout] f01309710526f8c3f88f1744b9857b5129cf8c247ccf0d653059162bd10a316e