[INFO] crate libprosic 0.7.3 is already in cache [INFO] testing libprosic-0.7.3 against beta-2019-09-28 for beta-1.39-1 [INFO] extracting crate libprosic 0.7.3 into work/builds/worker-5/source [INFO] validating manifest of crates.io crate libprosic 0.7.3 on toolchain beta-2019-09-28 [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate libprosic 0.7.3 [INFO] finished tweaking crates.io crate libprosic 0.7.3 [INFO] tweaked toml for crates.io crate libprosic 0.7.3 written to work/builds/worker-5/source/Cargo.toml [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "build" "--frozen"` [INFO] [stdout] b3ddaf0a7d5c1f8c6f334c57dad87d43588e9cac43bd85e721c8716fb1339396 [INFO] running `"docker" "start" "-a" "b3ddaf0a7d5c1f8c6f334c57dad87d43588e9cac43bd85e721c8716fb1339396"` [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling bio v0.24.0 [INFO] [stderr] Compiling ndarray v0.6.10 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling c_vec v1.0.12 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling cached v0.7.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling GSL v1.1.0 [INFO] [stderr] Compiling itertools v0.6.5 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling lzma-sys v0.1.15 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling num-complex v0.1.43 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling rulinalg v0.2.2 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling aho-corasick v0.6.10 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling bstr v0.2.8 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling rusty-machine v0.4.4 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling env_logger v0.5.13 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling bindgen v0.36.1 [INFO] [stderr] Compiling rust-htslib v0.22.0 [INFO] [stderr] Compiling libprosic v0.7.3 (/opt/rustwide/workdir) [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:62:20 [INFO] [stderr] | [INFO] [stderr] 62 | let variants = try!(utils::collect_variants( [INFO] [stderr] | ^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:70:21 [INFO] [stderr] | [INFO] [stderr] 70 | let chrom_seq = try!(reference_buffer.seq(&chrom)); [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:75:18 [INFO] [stderr] | [INFO] [stderr] 75 | Some(try!(joint_model.pileup( [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:159:26 [INFO] [stderr] | [INFO] [stderr] 159 | let mut writer = try!(csv::WriterBuilder::new() [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/model/sample.rs:76:17 [INFO] [stderr] | [INFO] [stderr] 76 | try!(self.reader.fetch(tid, window_start, end)); [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/call/pairwise.rs:55:62 [INFO] [stderr] | [INFO] [stderr] 55 | ) -> Result>>, Box> [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/call/pairwise.rs:116:21 [INFO] [stderr] | [INFO] [stderr] 116 | ) -> Result<(), Box> [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/estimation/alignment_properties.rs:40:68 [INFO] [stderr] | [INFO] [stderr] 40 | pub fn estimate(bam: &mut R) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/estimation/alignment_properties.rs:142:33 [INFO] [stderr] | [INFO] [stderr] 142 | ) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/estimation/fdr/ev.rs:35:21 [INFO] [stderr] | [INFO] [stderr] 35 | ) -> Result<(), Box> [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/fragments.rs:52:89 [INFO] [stderr] | [INFO] [stderr] 52 | pub fn estimate_insert_size(left: &bam::Record, right: &bam::Record) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/fragments.rs:56:68 [INFO] [stderr] | [INFO] [stderr] 56 | let aln = |rec: &bam::Record, cigar| -> Result<(u32, u32), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/fragments.rs:120:41 [INFO] [stderr] | [INFO] [stderr] 120 | ) -> Result<(LogProb, LogProb), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:30:49 [INFO] [stderr] | [INFO] [stderr] 30 | ) -> Result, Box>; [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:56:49 [INFO] [stderr] | [INFO] [stderr] 56 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:101:49 [INFO] [stderr] | [INFO] [stderr] 101 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:169:49 [INFO] [stderr] | [INFO] [stderr] 169 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:68:82 [INFO] [stderr] | [INFO] [stderr] 68 | pub fn fill(&mut self, chrom: &[u8], start: u32, end: u32) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:220:39 [INFO] [stderr] | [INFO] [stderr] 220 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:362:42 [INFO] [stderr] | [INFO] [stderr] 362 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:363:34 [INFO] [stderr] | [INFO] [stderr] 363 | let mut evidence: RefMut = match variant { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn evidence::reads::AbstractReadEvidence` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:409:42 [INFO] [stderr] | [INFO] [stderr] 409 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:412:44 [INFO] [stderr] | [INFO] [stderr] 412 | -> Result<(LogProb, LogProb), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/mod.rs:275:41 [INFO] [stderr] | [INFO] [stderr] 275 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/mod.rs:416:42 [INFO] [stderr] | [INFO] [stderr] 416 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:27:46 [INFO] [stderr] | [INFO] [stderr] 27 | ) -> Result>, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:204:62 [INFO] [stderr] | [INFO] [stderr] 204 | pub fn seq(&mut self, chrom: &[u8]) -> Result<&[u8], Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:232:39 [INFO] [stderr] | [INFO] [stderr] 232 | ) -> Result>, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:276:35 [INFO] [stderr] | [INFO] [stderr] 276 | ) -> Result>, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:317:21 [INFO] [stderr] | [INFO] [stderr] 317 | ) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:367:30 [INFO] [stderr] | [INFO] [stderr] 367 | ) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'std::sync::ONCE_INIT': the `new` function is now preferred [INFO] [stderr] --> src/model/evidence/reads.rs:335:1 [INFO] [stderr] | [INFO] [stderr] 335 | / lazy_static! { [INFO] [stderr] 336 | | static ref PROB_CONFUSION: LogProb = LogProb::from(Prob(0.3333)); [INFO] [stderr] 337 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'std::sync::ONCE_INIT': the `new` function is now preferred [INFO] [stderr] --> src/model/priors/single_cell_bulk.rs:26:1 [INFO] [stderr] | [INFO] [stderr] 26 | / cached! { [INFO] [stderr] 27 | | AMPLIF_CACHE: UnboundCache<(AlleleFreq, usize, usize), LogProb> = UnboundCache::new(); [INFO] [stderr] 28 | | // Lodato et al. 2015, Science, Supplementary Information, pages 8f and Fig. S5 (A, C, E) [INFO] [stderr] 29 | | // TODO: allow for non-default Lodato model parameters, e.g. learned from the data at hand [INFO] [stderr] ... | [INFO] [stderr] 96 | | } [INFO] [stderr] 97 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 40.28s [INFO] running `"docker" "inspect" "b3ddaf0a7d5c1f8c6f334c57dad87d43588e9cac43bd85e721c8716fb1339396"` [INFO] running `"docker" "rm" "-f" "b3ddaf0a7d5c1f8c6f334c57dad87d43588e9cac43bd85e721c8716fb1339396"` [INFO] [stdout] b3ddaf0a7d5c1f8c6f334c57dad87d43588e9cac43bd85e721c8716fb1339396 [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen" "--no-run"` [INFO] [stdout] 23ad4ef97498321ed5c2397d429f7383e55e1394877c9ab8121cb87e4329f22e [INFO] running `"docker" "start" "-a" "23ad4ef97498321ed5c2397d429f7383e55e1394877c9ab8121cb87e4329f22e"` [INFO] [stderr] Compiling memchr v0.1.11 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling fern v0.4.4 [INFO] [stderr] Compiling thread-id v2.0.0 [INFO] [stderr] Compiling hyper v0.10.16 [INFO] [stderr] Compiling thread_local v0.2.7 [INFO] [stderr] Compiling flate2 v0.2.20 [INFO] [stderr] Compiling aho-corasick v0.5.3 [INFO] [stderr] Compiling regex v0.1.80 [INFO] [stderr] Compiling env_logger v0.3.5 [INFO] [stderr] Compiling libprosic v0.7.3 (/opt/rustwide/workdir) [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:62:20 [INFO] [stderr] | [INFO] [stderr] 62 | let variants = try!(utils::collect_variants( [INFO] [stderr] | ^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:70:21 [INFO] [stderr] | [INFO] [stderr] 70 | let chrom_seq = try!(reference_buffer.seq(&chrom)); [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:75:18 [INFO] [stderr] | [INFO] [stderr] 75 | Some(try!(joint_model.pileup( [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/call/pairwise.rs:159:26 [INFO] [stderr] | [INFO] [stderr] 159 | let mut writer = try!(csv::WriterBuilder::new() [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead [INFO] [stderr] --> src/model/sample.rs:76:17 [INFO] [stderr] | [INFO] [stderr] 76 | try!(self.reader.fetch(tid, window_start, end)); [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/call/pairwise.rs:55:62 [INFO] [stderr] | [INFO] [stderr] 55 | ) -> Result>>, Box> [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/call/pairwise.rs:116:21 [INFO] [stderr] | [INFO] [stderr] 116 | ) -> Result<(), Box> [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/estimation/alignment_properties.rs:40:68 [INFO] [stderr] | [INFO] [stderr] 40 | pub fn estimate(bam: &mut R) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/estimation/alignment_properties.rs:142:33 [INFO] [stderr] | [INFO] [stderr] 142 | ) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/estimation/fdr/ev.rs:35:21 [INFO] [stderr] | [INFO] [stderr] 35 | ) -> Result<(), Box> [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/fragments.rs:52:89 [INFO] [stderr] | [INFO] [stderr] 52 | pub fn estimate_insert_size(left: &bam::Record, right: &bam::Record) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/fragments.rs:56:68 [INFO] [stderr] | [INFO] [stderr] 56 | let aln = |rec: &bam::Record, cigar| -> Result<(u32, u32), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/fragments.rs:120:41 [INFO] [stderr] | [INFO] [stderr] 120 | ) -> Result<(LogProb, LogProb), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:30:49 [INFO] [stderr] | [INFO] [stderr] 30 | ) -> Result, Box>; [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:56:49 [INFO] [stderr] | [INFO] [stderr] 56 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:101:49 [INFO] [stderr] | [INFO] [stderr] 101 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/evidence/reads.rs:169:49 [INFO] [stderr] | [INFO] [stderr] 169 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:68:82 [INFO] [stderr] | [INFO] [stderr] 68 | pub fn fill(&mut self, chrom: &[u8], start: u32, end: u32) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:220:39 [INFO] [stderr] | [INFO] [stderr] 220 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:362:42 [INFO] [stderr] | [INFO] [stderr] 362 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:363:34 [INFO] [stderr] | [INFO] [stderr] 363 | let mut evidence: RefMut = match variant { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn evidence::reads::AbstractReadEvidence` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:409:42 [INFO] [stderr] | [INFO] [stderr] 409 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/sample.rs:412:44 [INFO] [stderr] | [INFO] [stderr] 412 | -> Result<(LogProb, LogProb), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/mod.rs:275:41 [INFO] [stderr] | [INFO] [stderr] 275 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/model/mod.rs:416:42 [INFO] [stderr] | [INFO] [stderr] 416 | ) -> Result, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:27:46 [INFO] [stderr] | [INFO] [stderr] 27 | ) -> Result>, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:204:62 [INFO] [stderr] | [INFO] [stderr] 204 | pub fn seq(&mut self, chrom: &[u8]) -> Result<&[u8], Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:232:39 [INFO] [stderr] | [INFO] [stderr] 232 | ) -> Result>, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:276:35 [INFO] [stderr] | [INFO] [stderr] 276 | ) -> Result>, Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:317:21 [INFO] [stderr] | [INFO] [stderr] 317 | ) -> Result<(), Box> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/utils.rs:367:30 [INFO] [stderr] | [INFO] [stderr] 367 | ) -> Result> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Error` [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'std::sync::ONCE_INIT': the `new` function is now preferred [INFO] [stderr] --> src/model/evidence/reads.rs:335:1 [INFO] [stderr] | [INFO] [stderr] 335 | / lazy_static! { [INFO] [stderr] 336 | | static ref PROB_CONFUSION: LogProb = LogProb::from(Prob(0.3333)); [INFO] [stderr] 337 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: use of deprecated item 'std::sync::ONCE_INIT': the `new` function is now preferred [INFO] [stderr] --> src/model/priors/single_cell_bulk.rs:26:1 [INFO] [stderr] | [INFO] [stderr] 26 | / cached! { [INFO] [stderr] 27 | | AMPLIF_CACHE: UnboundCache<(AlleleFreq, usize, usize), LogProb> = UnboundCache::new(); [INFO] [stderr] 28 | | // Lodato et al. 2015, Science, Supplementary Information, pages 8f and Fig. S5 (A, C, E) [INFO] [stderr] 29 | | // TODO: allow for non-default Lodato model parameters, e.g. learned from the data at hand [INFO] [stderr] ... | [INFO] [stderr] 96 | | } [INFO] [stderr] 97 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = note: this warning originates in a macro outside of the current crate (in Nightly builds, run with -Z external-macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] error: linking with `cc` failed: exit code: 1 [INFO] [stderr] | [INFO] [stderr] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.0.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.1.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.10.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.11.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.12.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.13.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.14.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.15.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.2.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.3.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.4.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.5.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.6.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.7.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.8.rcgu.o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.libprosic.3ym6qwcu-cgu.9.rcgu.o" "-o" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39" "/opt/rustwide/target/debug/deps/libprosic-96e12c8032e71c39.2gjf4epf33wmbgya.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/target/debug/build/miniz-sys-6fe73e17669e05dc/out" "-L" "/opt/rustwide/target/debug/build/rust-htslib-96ecbf4a0a9c81da/out" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-e88e5e1390a4bd4f/out/lib" "-L" "/usr/lib/x86_64-linux-gnu" "-L" "/usr/lib/x86_64-linux-gnu" "-L" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libtest-333416314d364512.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libterm-4e7423c6db5d181f.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgetopts-794cd61d53274767.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunicode_width-93936a2bba77ec06.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_std-7618b5c9c4d09931.rlib" "/opt/rustwide/target/debug/deps/libenv_logger-def1072acf51ed3d.rlib" "/opt/rustwide/target/debug/deps/libregex-1e599427f4f51957.rlib" "/opt/rustwide/target/debug/deps/libutf8_ranges-90f52effbe3e1836.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-7ca80216cc8c8385.rlib" "/opt/rustwide/target/debug/deps/libthread_local-f25d58fc9eb8a2cf.rlib" "/opt/rustwide/target/debug/deps/libthread_id-99506ad3dd506303.rlib" "/opt/rustwide/target/debug/deps/libaho_corasick-f2244199d4c09150.rlib" "/opt/rustwide/target/debug/deps/libmemchr-0d3ffca6c340ad2a.rlib" "/opt/rustwide/target/debug/deps/libcached-f65aadca1dc4399b.rlib" "/opt/rustwide/target/debug/deps/libregex-d3cb2135d441e640.rlib" "/opt/rustwide/target/debug/deps/libutf8_ranges-687edc54876da679.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-cc5e3a84ad432637.rlib" "/opt/rustwide/target/debug/deps/libucd_util-a5695876e59041e2.rlib" "/opt/rustwide/target/debug/deps/libaho_corasick-ab13c211fd403e37.rlib" "/opt/rustwide/target/debug/deps/librusty_machine-a256a8d9cd1a16c6.rlib" "/opt/rustwide/target/debug/deps/librulinalg-3f95e525f8e9fd4a.rlib" "/opt/rustwide/target/debug/deps/libnum-b57528460172548f.rlib" "/opt/rustwide/target/debug/deps/libnum_iter-c810663dab3e9f7e.rlib" "/opt/rustwide/target/debug/deps/libndarray-e2459e0971de6526.rlib" "/opt/rustwide/target/debug/deps/libnum_complex-130d1fb5fbce7425.rlib" "/opt/rustwide/target/debug/deps/libnum_traits-9e7476a46395f1ad.rlib" "/opt/rustwide/target/debug/deps/libitertools-b71e187128f821ce.rlib" "/opt/rustwide/target/debug/deps/libapprox-18d240db38cea552.rlib" "/opt/rustwide/target/debug/deps/librgsl-464eb302f23475cc.rlib" "/opt/rustwide/target/debug/deps/libc_vec-6840fb8c706e6ba8.rlib" "/opt/rustwide/target/debug/deps/liblog-03e85f8c88e058b0.rlib" "/opt/rustwide/target/debug/deps/liblog-5513cb556299afcf.rlib" "/opt/rustwide/target/debug/deps/libcfg_if-1e2186a891f602d1.rlib" "/opt/rustwide/target/debug/deps/librust_htslib-5fcebb7fc10e52a7.rlib" "/opt/rustwide/target/debug/deps/liblzma_sys-2986a0071f380e0d.rlib" "/opt/rustwide/target/debug/deps/libbzip2_sys-bb702270d5d8a7d7.rlib" "/opt/rustwide/target/debug/deps/liblibz_sys-09c58ded22f7a973.rlib" "/opt/rustwide/target/debug/deps/liblinear_map-58376a02dfe71761.rlib" "/opt/rustwide/target/debug/deps/liburl-a72a174ec3a5c69b.rlib" "/opt/rustwide/target/debug/deps/libpercent_encoding-24177bf8e4a597fd.rlib" "/opt/rustwide/target/debug/deps/libidna-045d1ae9b0112dc5.rlib" "/opt/rustwide/target/debug/deps/libunicode_normalization-c65379e9aa11b52d.rlib" "/opt/rustwide/target/debug/deps/libsmallvec-a6ff3ddf243f392a.rlib" "/opt/rustwide/target/debug/deps/libunicode_bidi-5b064f932e6646ad.rlib" "/opt/rustwide/target/debug/deps/libmatches-25f72eb55a371331.rlib" "/opt/rustwide/target/debug/deps/liblazy_static-47d24117de3918be.rlib" "/opt/rustwide/target/debug/deps/libitertools-65779c57c95be68c.rlib" "/opt/rustwide/target/debug/deps/libieee754-97aa23e724f660bd.rlib" "/opt/rustwide/target/debug/deps/libbitflags-920bcd2eac591960.rlib" "/opt/rustwide/target/debug/deps/libbio-6afac6ea21bd2b1a.rlib" "/opt/rustwide/target/debug/deps/libfxhash-6c59c41fea9e8ddd.rlib" "/opt/rustwide/target/debug/deps/libvec_map-b88c7842e4422229.rlib" "/opt/rustwide/target/debug/deps/libstatrs-90f5ef058236751d.rlib" "/opt/rustwide/target/debug/deps/librand-97616d28e0c4176c.rlib" "/opt/rustwide/target/debug/deps/librand-9edf430c3e157339.rlib" "/opt/rustwide/target/debug/deps/libfnv-593caa3c2629b83d.rlib" "/opt/rustwide/target/debug/deps/libbv-c6cf8fe3584dd2a5.rlib" "/opt/rustwide/target/debug/deps/libordered_float-c76da1f51f9731b0.rlib" "/opt/rustwide/target/debug/deps/libnum_integer-2dd52f0ea276c9ff.rlib" "/opt/rustwide/target/debug/deps/libnewtype_derive-635c713e349bdbd4.rlib" "/opt/rustwide/target/debug/deps/libndarray-057cd3a1409ddf69.rlib" "/opt/rustwide/target/debug/deps/libnum_complex-2bfbb2133dc12204.rlib" "/opt/rustwide/target/debug/deps/libmatrixmultiply-52e0ac25033cd383.rlib" "/opt/rustwide/target/debug/deps/librawpointer-9eec285a84ee4032.rlib" "/opt/rustwide/target/debug/deps/libmultimap-f11878586df28cbd.rlib" "/opt/rustwide/target/debug/deps/libitertools_num-4d0b74c53a142160.rlib" "/opt/rustwide/target/debug/deps/libitertools-57b1f43b793c2f74.rlib" "/opt/rustwide/target/debug/deps/libeither-a375c15081516f4e.rlib" "/opt/rustwide/target/debug/deps/libcustom_derive-1a26498bf02af92d.rlib" "/opt/rustwide/target/debug/deps/libcsv-ee08ce30984a8c21.rlib" "/opt/rustwide/target/debug/deps/libryu-6dbb2e6f31cf0558.rlib" "/opt/rustwide/target/debug/deps/libitoa-e736842aeff4074b.rlib" "/opt/rustwide/target/debug/deps/libcsv_core-4ac837c6e52250f9.rlib" "/opt/rustwide/target/debug/deps/libbstr-98951cfac495bf07.rlib" "/opt/rustwide/target/debug/deps/libregex_automata-0293950fd499c502.rlib" "/opt/rustwide/target/debug/deps/libbyteorder-fdd43a3ae319d8ce.rlib" "/opt/rustwide/target/debug/deps/libbytecount-87f025bdcf811407.rlib" "/opt/rustwide/target/debug/deps/libbit_set-e831679a86d1ec23.rlib" "/opt/rustwide/target/debug/deps/libbit_vec-223fe1d81301185c.rlib" "/opt/rustwide/target/debug/deps/libapprox-46427b9d8127f102.rlib" "/opt/rustwide/target/debug/deps/libnum_traits-a49361b936b25068.rlib" "/opt/rustwide/target/debug/deps/libbio_types-222791f593d014d4.rlib" "/opt/rustwide/target/debug/deps/libserde-7b151d47f3e0e035.rlib" "/opt/rustwide/target/debug/deps/libregex-5ff068f42fb3fa03.rlib" "/opt/rustwide/target/debug/deps/libthread_local-476b4cfeb59ceacc.rlib" "/opt/rustwide/target/debug/deps/libregex_syntax-641806fdaa87370c.rlib" "/opt/rustwide/target/debug/deps/libaho_corasick-9a5855fdac6020d7.rlib" "/opt/rustwide/target/debug/deps/libmemchr-7611678294fb66dd.rlib" "/opt/rustwide/target/debug/deps/liblibc-c08aaedaa0b96ef3.rlib" "/opt/rustwide/target/debug/deps/liblazy_static-955d54352a795d1f.rlib" "/opt/rustwide/target/debug/deps/libquick_error-9411b7aab885de58.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-db812c66f862af4c.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-e7871a21575d5ff7.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-2f2c581bc0d759e6.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-35731cabc05dc8a0.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace-36477394541292db.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libbacktrace_sys-8b706b170c1272d8.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-801dbb3043ccf581.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-a32aa66ce6f72b21.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-d00ea3bfb2bb6c00.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-d2c6ebe88c3e113c.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-df74f62f6bb60621.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-2170473575daeedb.rlib" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-1a08089bbddc4f51.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/beta-2019-09-28-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-f8f562e5472ad5c3.rlib" "-Wl,-Bdynamic" "-llzma" "-lz" "-lutil" "-lutil" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-lutil" [INFO] [stderr] = note: /opt/rustwide/target/debug/deps/librgsl-464eb302f23475cc.rlib(rgsl-464eb302f23475cc.rgsl.2phtyn0z-cgu.10.rcgu.o): In function `rgsl::error::erfc': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/GSL-1.1.0/src/error.rs:28: undefined reference to `gsl_sf_erfc' [INFO] [stderr] /opt/rustwide/target/debug/deps/librgsl-464eb302f23475cc.rlib(rgsl-464eb302f23475cc.rgsl.2phtyn0z-cgu.13.rcgu.o): In function `rgsl::randist::gaussian::gaussian_pdf': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/GSL-1.1.0/src/randist/gaussian.rs:20: undefined reference to `gsl_ran_gaussian_pdf' [INFO] [stderr] /opt/rustwide/target/debug/deps/librgsl-464eb302f23475cc.rlib(rgsl-464eb302f23475cc.rgsl.2phtyn0z-cgu.13.rcgu.o): In function `rgsl::randist::gaussian::ugaussian_P': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/GSL-1.1.0/src/randist/gaussian.rs:73: undefined reference to `gsl_cdf_ugaussian_P' [INFO] [stderr] collect2: error: ld returned 1 exit status [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] error: aborting due to previous error [INFO] [stderr] [INFO] [stderr] error: could not compile `libprosic`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `"docker" "inspect" "23ad4ef97498321ed5c2397d429f7383e55e1394877c9ab8121cb87e4329f22e"` [INFO] running `"docker" "rm" "-f" "23ad4ef97498321ed5c2397d429f7383e55e1394877c9ab8121cb87e4329f22e"` [INFO] [stdout] 23ad4ef97498321ed5c2397d429f7383e55e1394877c9ab8121cb87e4329f22e