[INFO] updating cached repository https://github.com/zaeleus/noodles [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/big/crater/work/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 29afcb400370b3f2124794a43c119b5a8ee3acd3 [INFO] testing zaeleus/noodles against beta-2019-09-28 for beta-1.39-1 [INFO] running `"git" "clone" "work/cache/git-repos/https%3A%2F%2Fgithub.com%2Fzaeleus%2Fnoodles" "work/builds/worker-4/source"` [INFO] [stderr] Cloning into 'work/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/zaeleus/noodles on toolchain beta-2019-09-28 [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/zaeleus/noodles [INFO] finished tweaking git repo https://github.com/zaeleus/noodles [INFO] tweaked toml for git repo https://github.com/zaeleus/noodles written to work/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/zaeleus/noodles already has a lockfile, it will not be regenerated [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "build" "--frozen"` [INFO] [stdout] 884b9cd1aa13d978301e7557e322cdbca3b8006ca8e06613761003faf9f945e1 [INFO] running `"docker" "start" "-a" "884b9cd1aa13d978301e7557e322cdbca3b8006ca8e06613761003faf9f945e1"` [INFO] [stderr] Compiling serde v1.0.81 [INFO] [stderr] Compiling crc32fast v1.1.2 [INFO] [stderr] Compiling memchr v2.1.1 [INFO] [stderr] Compiling miniz-sys v0.1.11 [INFO] [stderr] Compiling flate2 v1.0.6 [INFO] [stderr] Compiling csv-core v0.1.4 [INFO] [stderr] Compiling csv v1.0.2 [INFO] [stderr] Compiling noodles v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 17.85s [INFO] running `"docker" "inspect" "884b9cd1aa13d978301e7557e322cdbca3b8006ca8e06613761003faf9f945e1"` [INFO] running `"docker" "rm" "-f" "884b9cd1aa13d978301e7557e322cdbca3b8006ca8e06613761003faf9f945e1"` [INFO] [stdout] 884b9cd1aa13d978301e7557e322cdbca3b8006ca8e06613761003faf9f945e1 [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen" "--no-run"` [INFO] [stdout] b30b9d03acc48f6f1d518a0a640a624c97383d56ab1673b5ffa58c7bd91b2b84 [INFO] running `"docker" "start" "-a" "b30b9d03acc48f6f1d518a0a640a624c97383d56ab1673b5ffa58c7bd91b2b84"` [INFO] [stderr] Compiling noodles v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.96s [INFO] running `"docker" "inspect" "b30b9d03acc48f6f1d518a0a640a624c97383d56ab1673b5ffa58c7bd91b2b84"` [INFO] running `"docker" "rm" "-f" "b30b9d03acc48f6f1d518a0a640a624c97383d56ab1673b5ffa58c7bd91b2b84"` [INFO] [stdout] b30b9d03acc48f6f1d518a0a640a624c97383d56ab1673b5ffa58c7bd91b2b84 [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen"` [INFO] [stdout] 9ce35c476dbbf57b4655f03695079ddb642b3dc0de278837a4da4b4180f0fe41 [INFO] running `"docker" "start" "-a" "9ce35c476dbbf57b4655f03695079ddb642b3dc0de278837a4da4b4180f0fe41"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.09s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/noodles-6342ce4ab39cd1f6 [INFO] [stdout] [INFO] [stdout] running 54 tests [INFO] [stdout] test base::tests::test_complement ... ok [INFO] [stdout] test base::tests::test_from_char ... ok [INFO] [stdout] test base::tests::test_symbol ... ok [INFO] [stdout] test base::tests::test_description ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_fmt ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_from_op_for_u32 ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_from_u32 ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_op ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_len ... ok [INFO] [stdout] test formats::bam::data::value::tests::test_subtype ... ok [INFO] [stdout] test formats::bam::cigar::tests::test_from_bytes ... ok [INFO] [stdout] test formats::bam::flag::tests::test_empty_flag ... ok [INFO] [stdout] test formats::bam::data::value::tests::test_ty ... ok [INFO] [stdout] test formats::bam::data::reader::tests::test_read_field ... ok [INFO] [stdout] test formats::bam::flag::tests::test_flags ... ok [INFO] [stdout] test formats::bam::record::tests::test_block_size ... ok [INFO] [stdout] test formats::bam::record::tests::test_data ... ok [INFO] [stdout] test formats::bam::quality::tests::test_chars ... ok [INFO] [stdout] test formats::bam::record::tests::test_bin ... ok [INFO] [stdout] test formats::bam::record::tests::test_cigar ... ok [INFO] [stdout] test formats::bam::record::tests::test_n_cigar_op ... ok [INFO] [stdout] test formats::bam::record::tests::test_next_pos ... ok [INFO] [stdout] test formats::bam::record::tests::test_l_read_name ... ok [INFO] [stdout] test formats::bam::record::tests::test_flag ... ok [INFO] [stdout] test formats::bam::record::tests::test_l_seq ... ok [INFO] [stdout] test formats::bam::record::tests::test_mapq ... ok [INFO] [stdout] test formats::bam::record::tests::test_read_name ... ok [INFO] [stdout] test formats::bam::record::tests::test_pos ... ok [INFO] [stdout] test formats::bam::sequence::tests::test_complement ... ok [INFO] [stdout] test formats::bam::record::tests::test_tlen ... ok [INFO] [stdout] test formats::gff::record::tests::test_feature ... ok [INFO] [stdout] test formats::bam::record::tests::test_next_ref_id ... ok [INFO] [stdout] test formats::fastq::reader::tests::test_read_record ... ok [INFO] [stdout] test formats::gff::record::tests::test_is_empty ... ok [INFO] [stdout] test formats::gff::record::tests::test_attributes ... ok [INFO] [stdout] test formats::gff::attributes::tests::test_trim_quotes ... ok [INFO] [stdout] test formats::bam::record::tests::test_ref_id ... ok [INFO] [stdout] test formats::bam::record::tests::test_qual ... ok [INFO] [stdout] test formats::gff::attributes::attributes_iter_tests::test_next ... ok [INFO] [stdout] test formats::fastq::reader::tests::test_read_line ... ok [INFO] [stdout] test formats::gff::record::tests::test_score ... ok [INFO] [stdout] test formats::bam::record::tests::test_seq ... ok [INFO] [stdout] test formats::gff::record::tests::test_seq_name ... ok [INFO] [stdout] test formats::gff::record::tests::test_end ... ok [INFO] [stdout] test formats::gff::strand::tests::test_from_str ... ok [INFO] [stdout] test formats::gff::strand::tests::test_default ... ok [INFO] [stdout] test formats::gff::record::tests::test_start ... ok [INFO] [stdout] test formats::gff::record::tests::test_frame ... ok [INFO] [stdout] test formats::gff::record::tests::test_validate_empty ... ok [INFO] [stdout] test formats::gff::record::tests::test_strand ... ok [INFO] [stdout] test formats::gff::strand::tests::test_display ... ok [INFO] [stdout] test formats::gff::record::tests::test_source ... ok [INFO] [stdout] test formats::bam::sequence::tests::test_complement_with_invalid_symbol ... ok [INFO] [stdout] test formats::bam::cigar::op::tests::test_from_u32_with_invalid_op ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 54 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests noodles [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test src/formats/gff/attributes.rs - formats::gff::attributes::Attributes::iter (line 50) ... ok [INFO] [stdout] test src/formats/fastq/record.rs - formats::fastq::record::Record::clear (line 76) ... ok [INFO] [stdout] test src/formats/fastq/record.rs - formats::fastq::record::Record::new (line 15) ... ok [INFO] [stdout] test src/formats/gff/attributes.rs - formats::gff::attributes::Attributes::get (line 32) ... ok [INFO] [stdout] test src/formats/gff/attributes.rs - formats::gff::attributes::Attributes::new (line 14) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "9ce35c476dbbf57b4655f03695079ddb642b3dc0de278837a4da4b4180f0fe41"` [INFO] running `"docker" "rm" "-f" "9ce35c476dbbf57b4655f03695079ddb642b3dc0de278837a4da4b4180f0fe41"` [INFO] [stdout] 9ce35c476dbbf57b4655f03695079ddb642b3dc0de278837a4da4b4180f0fe41