[INFO] updating cached repository https://github.com/yitapi/analyze_amplicons
[INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/big/crater/work/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"`
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] be4f0e4f49256237f3026919a2742eb16e73dd75
[INFO] testing yitapi/analyze_amplicons against beta-2019-09-28 for beta-1.39-1
[INFO] running `"git" "clone" "work/cache/git-repos/https%3A%2F%2Fgithub.com%2Fyitapi%2Fanalyze_amplicons" "work/builds/worker-4/source"`
[INFO] [stderr] Cloning into 'work/builds/worker-4/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/yitapi/analyze_amplicons on toolchain beta-2019-09-28
[INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started tweaking git repo https://github.com/yitapi/analyze_amplicons
[INFO] finished tweaking git repo https://github.com/yitapi/analyze_amplicons
[INFO] tweaked toml for git repo https://github.com/yitapi/analyze_amplicons written to work/builds/worker-4/source/Cargo.toml
[INFO] crate git repo https://github.com/yitapi/analyze_amplicons already has a lockfile, it will not be regenerated
[INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "build" "--frozen"`
[INFO] [stdout] ebf98cbc0dabe06c1510d9ba314c5f92ec19a183234d8760e877df168cfc2e19
[INFO] running `"docker" "start" "-a" "ebf98cbc0dabe06c1510d9ba314c5f92ec19a183234d8760e877df168cfc2e19"`
[INFO] [stderr]    Compiling either v1.0.2
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling quick-error v1.1.0
[INFO] [stderr]    Compiling vec_map v0.6.0
[INFO] [stderr]    Compiling itertools-num v0.1.1
[INFO] [stderr]    Compiling memchr v1.0.1
[INFO] [stderr]    Compiling num-complex v0.1.35
[INFO] [stderr]    Compiling num-bigint v0.1.35
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling num-iter v0.1.32
[INFO] [stderr]    Compiling ordered-float v0.3.0
[INFO] [stderr]    Compiling itertools v0.5.9
[INFO] [stderr]    Compiling csv v0.15.0
[INFO] [stderr]    Compiling num-rational v0.1.35
[INFO] [stderr]    Compiling num v0.1.36
[INFO] [stderr]    Compiling nalgebra v0.10.1
[INFO] [stderr]    Compiling bio v0.10.0 (https://github.com/yitapi/rust-bio#24e457b1)
[INFO] [stderr]    Compiling analyze_amplicon v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stderr]   --> src/main.rs:92:22
[INFO] [stderr]    |
[INFO] [stderr] 92 |     let mut output = try!(File::create(output_file));
[INFO] [stderr]    |                      ^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stderr]    --> src/main.rs:137:9
[INFO] [stderr]     |
[INFO] [stderr] 137 |         try!(write!(output, "{} {} {}\n", pac, hamming(&pac, &wt_pac), counts));
[INFO] [stderr]     |         ^^^
[INFO] [stderr] 
[INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stderr]   --> src/main.rs:86:101
[INFO] [stderr]    |
[INFO] [stderr] 86 | fn data_stat(results: &HashMap<String, (String, Vec<u8>)>, output_file: &str) -> Result<String, Box<Error>> {
[INFO] [stderr]    |                                                                                                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused `std::result::Result` that must be used
[INFO] [stderr]    --> src/main.rs:350:5
[INFO] [stderr]     |
[INFO] [stderr] 350 |     data_stat(&results, &args[4]);
[INFO] [stderr]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stderr]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stderr] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 16.26s
[INFO] running `"docker" "inspect" "ebf98cbc0dabe06c1510d9ba314c5f92ec19a183234d8760e877df168cfc2e19"`
[INFO] running `"docker" "rm" "-f" "ebf98cbc0dabe06c1510d9ba314c5f92ec19a183234d8760e877df168cfc2e19"`
[INFO] [stdout] ebf98cbc0dabe06c1510d9ba314c5f92ec19a183234d8760e877df168cfc2e19
[INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen" "--no-run"`
[INFO] [stdout] c6ce86e7bf6310fea4475d6a1842428e3363d8c0ed36d99115f0179742d232d2
[INFO] running `"docker" "start" "-a" "c6ce86e7bf6310fea4475d6a1842428e3363d8c0ed36d99115f0179742d232d2"`
[INFO] [stderr]    Compiling analyze_amplicon v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stderr]   --> src/main.rs:92:22
[INFO] [stderr]    |
[INFO] [stderr] 92 |     let mut output = try!(File::create(output_file));
[INFO] [stderr]    |                      ^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: use of deprecated item 'try': use the `?` operator instead
[INFO] [stderr]    --> src/main.rs:137:9
[INFO] [stderr]     |
[INFO] [stderr] 137 |         try!(write!(output, "{} {} {}\n", pac, hamming(&pac, &wt_pac), counts));
[INFO] [stderr]     |         ^^^
[INFO] [stderr] 
[INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated
[INFO] [stderr]   --> src/main.rs:86:101
[INFO] [stderr]    |
[INFO] [stderr] 86 | fn data_stat(results: &HashMap<String, (String, Vec<u8>)>, output_file: &str) -> Result<String, Box<Error>> {
[INFO] [stderr]    |                                                                                                     ^^^^^ help: use `dyn`: `dyn Error`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(bare_trait_objects)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused `std::result::Result` that must be used
[INFO] [stderr]    --> src/main.rs:350:5
[INFO] [stderr]     |
[INFO] [stderr] 350 |     data_stat(&results, &args[4]);
[INFO] [stderr]     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_must_use)]` on by default
[INFO] [stderr]     = note: this `Result` may be an `Err` variant, which should be handled
[INFO] [stderr] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1.28s
[INFO] running `"docker" "inspect" "c6ce86e7bf6310fea4475d6a1842428e3363d8c0ed36d99115f0179742d232d2"`
[INFO] running `"docker" "rm" "-f" "c6ce86e7bf6310fea4475d6a1842428e3363d8c0ed36d99115f0179742d232d2"`
[INFO] [stdout] c6ce86e7bf6310fea4475d6a1842428e3363d8c0ed36d99115f0179742d232d2
[INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen"`
[INFO] [stdout] 7a057e291731020c6c2c7a82e11573c0dc1d006793b96317306b169bbb11ee37
[INFO] running `"docker" "start" "-a" "7a057e291731020c6c2c7a82e11573c0dc1d006793b96317306b169bbb11ee37"`
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 0.02s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/analyze_amplicon-d116edda14996e01
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `"docker" "inspect" "7a057e291731020c6c2c7a82e11573c0dc1d006793b96317306b169bbb11ee37"`
[INFO] running `"docker" "rm" "-f" "7a057e291731020c6c2c7a82e11573c0dc1d006793b96317306b169bbb11ee37"`
[INFO] [stdout] 7a057e291731020c6c2c7a82e11573c0dc1d006793b96317306b169bbb11ee37