[INFO] updating cached repository https://github.com/Arkanosis/bamrescue [INFO] running `"git" "-c" "credential.helper=" "-c" "credential.helper=/big/crater/work/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune"` [INFO] [stderr] From https://github.com/Arkanosis/bamrescue [INFO] [stderr] - [deleted] (none) -> dependabot/cargo/futures-0.1.29 [INFO] [stderr] - [deleted] (none) -> dependabot/cargo/indicatif-0.12.0 [INFO] [stderr] - [deleted] (none) -> dependabot/cargo/serde-1.0.101 [INFO] [stderr] - [deleted] (none) -> dependabot/cargo/serde_derive-1.0.101 [INFO] [stderr] 54d3d4f..21a03ed master -> master [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 21a03edeedc999ccf18d8d465e3dd90e387d3ff3 [INFO] testing Arkanosis/bamrescue against beta-2019-09-28 for beta-1.39-1 [INFO] running `"git" "clone" "work/cache/git-repos/https%3A%2F%2Fgithub.com%2FArkanosis%2Fbamrescue" "work/builds/worker-4/source"` [INFO] [stderr] Cloning into 'work/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Arkanosis/bamrescue on toolchain beta-2019-09-28 [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking git repo https://github.com/Arkanosis/bamrescue [INFO] finished tweaking git repo https://github.com/Arkanosis/bamrescue [INFO] tweaked toml for git repo https://github.com/Arkanosis/bamrescue written to work/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/Arkanosis/bamrescue already has a lockfile, it will not be regenerated [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+beta-2019-09-28" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "build" "--frozen"` [INFO] [stdout] 8b60273151c131ddebc702bd2b709974f9b62e0121eb26b78b53264aa778b3cf [INFO] running `"docker" "start" "-a" "8b60273151c131ddebc702bd2b709974f9b62e0121eb26b78b53264aa778b3cf"` [INFO] [stderr] Compiling number_prefix v0.3.0 [INFO] [stderr] Compiling syn v1.0.5 [INFO] [stderr] Compiling indicatif v0.12.0 [INFO] [stderr] Compiling serde_derive v1.0.101 [INFO] [stderr] Compiling serde v1.0.101 [INFO] [stderr] Compiling docopt v1.1.0 [INFO] [stderr] Compiling bamrescue v0.3.0-dev (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 40.61s [INFO] running `"docker" "inspect" "8b60273151c131ddebc702bd2b709974f9b62e0121eb26b78b53264aa778b3cf"` [INFO] running `"docker" "rm" "-f" "8b60273151c131ddebc702bd2b709974f9b62e0121eb26b78b53264aa778b3cf"` [INFO] [stdout] 8b60273151c131ddebc702bd2b709974f9b62e0121eb26b78b53264aa778b3cf [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen" "--no-run"` [INFO] [stdout] 0d8fdb8665add6a67ad3f51a262f3335d9b891f071a9ede59d57a64045674424 [INFO] running `"docker" "start" "-a" "0d8fdb8665add6a67ad3f51a262f3335d9b891f071a9ede59d57a64045674424"` [INFO] [stderr] Compiling bamrescue v0.3.0-dev (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.34s [INFO] running `"docker" "inspect" "0d8fdb8665add6a67ad3f51a262f3335d9b891f071a9ede59d57a64045674424"` [INFO] running `"docker" "rm" "-f" "0d8fdb8665add6a67ad3f51a262f3335d9b891f071a9ede59d57a64045674424"` [INFO] [stdout] 0d8fdb8665add6a67ad3f51a262f3335d9b891f071a9ede59d57a64045674424 [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2019-09-28" "test" "--frozen"` [INFO] [stdout] 25a59cf96cf100cdacaf90abc47154d81efa0689269e0802baa5a8520abed4ca [INFO] running `"docker" "start" "-a" "25a59cf96cf100cdacaf90abc47154d81efa0689269e0802baa5a8520abed4ca"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.22s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bamrescue-782312212fcb4ab5 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bamrescue-41e06b346588b3ce [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/check-99fe62d664517628 [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rescue-2330c3f4ff728166 [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/version-15dbabf773450801 [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test version ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests bamrescue [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "25a59cf96cf100cdacaf90abc47154d81efa0689269e0802baa5a8520abed4ca"` [INFO] running `"docker" "rm" "-f" "25a59cf96cf100cdacaf90abc47154d81efa0689269e0802baa5a8520abed4ca"` [INFO] [stdout] 25a59cf96cf100cdacaf90abc47154d81efa0689269e0802baa5a8520abed4ca