[INFO] crate bam 0.0.5 is already in cache [INFO] testing bam-0.0.5 against 1.38.0 for beta-1.39-1 [INFO] extracting crate bam 0.0.5 into work/builds/worker-2/source [INFO] validating manifest of crates.io crate bam 0.0.5 on toolchain 1.38.0 [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+1.38.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started tweaking crates.io crate bam 0.0.5 [INFO] finished tweaking crates.io crate bam 0.0.5 [INFO] tweaked toml for crates.io crate bam 0.0.5 written to work/builds/worker-2/source/Cargo.toml [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+1.38.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/big/crater/work/cargo-home/bin/cargo" "+1.38.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.38.0" "build" "--frozen"` [INFO] [stdout] e519b5f5e20c26941fcdb1f4e0fdb653e5775f2c9fd27b7ceb6679c51ace8395 [INFO] running `"docker" "start" "-a" "e519b5f5e20c26941fcdb1f4e0fdb653e5775f2c9fd27b7ceb6679c51ace8395"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling lru-cache v0.1.2 [INFO] [stderr] Compiling bam v0.0.5 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bam_reader.rs:148:20 [INFO] [stderr] | [INFO] [stderr] 148 | predicate: Box bool>, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Fn(&record::Record) -> bool` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bam_reader.rs:217:14 [INFO] [stderr] | [INFO] [stderr] 217 | Warn(Box), [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn Fn(&str)` [INFO] [stderr] [INFO] [stderr] Finished dev [optimized + debuginfo] target(s) in 1.98s [INFO] running `"docker" "inspect" "e519b5f5e20c26941fcdb1f4e0fdb653e5775f2c9fd27b7ceb6679c51ace8395"` [INFO] running `"docker" "rm" "-f" "e519b5f5e20c26941fcdb1f4e0fdb653e5775f2c9fd27b7ceb6679c51ace8395"` [INFO] [stdout] e519b5f5e20c26941fcdb1f4e0fdb653e5775f2c9fd27b7ceb6679c51ace8395 [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.38.0" "test" "--frozen" "--no-run"` [INFO] [stdout] 52968c999c3c0df9a24bcca7acd3cc42e3cef265ab4871f786348b2050043041 [INFO] running `"docker" "start" "-a" "52968c999c3c0df9a24bcca7acd3cc42e3cef265ab4871f786348b2050043041"` [INFO] [stderr] Compiling getrandom v0.1.12 [INFO] [stderr] Compiling ppv-lite86 v0.2.5 [INFO] [stderr] Compiling c2-chacha v0.2.2 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling rand v0.7.2 [INFO] [stderr] Compiling bam v0.0.5 (/opt/rustwide/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bam_reader.rs:148:20 [INFO] [stderr] | [INFO] [stderr] 148 | predicate: Box bool>, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn Fn(&record::Record) -> bool` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/bam_reader.rs:217:14 [INFO] [stderr] | [INFO] [stderr] 217 | Warn(Box), [INFO] [stderr] | ^^^^^^^^ help: use `dyn`: `dyn Fn(&str)` [INFO] [stderr] [INFO] [stderr] Finished dev [optimized + debuginfo] target(s) in 6.77s [INFO] running `"docker" "inspect" "52968c999c3c0df9a24bcca7acd3cc42e3cef265ab4871f786348b2050043041"` [INFO] running `"docker" "rm" "-f" "52968c999c3c0df9a24bcca7acd3cc42e3cef265ab4871f786348b2050043041"` [INFO] [stdout] 52968c999c3c0df9a24bcca7acd3cc42e3cef265ab4871f786348b2050043041 [INFO] running `"docker" "create" "-v" "/big/crater/work/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/big/crater/work/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/big/crater/work/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/big/crater/work/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env" "/opt/rustwide/cargo-home/bin/cargo" "+1.38.0" "test" "--frozen"` [INFO] [stdout] 18508194f6a970b86bc291f8e54f39dbc7f5f21dc0a2fce71e8a21ee8259ca41 [INFO] running `"docker" "start" "-a" "18508194f6a970b86bc291f8e54f39dbc7f5f21dc0a2fce71e8a21ee8259ca41"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished dev [optimized + debuginfo] target(s) in 1.37s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/bam-89133a854818731e [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/integration_test-5943a985e3c0dec7 [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test compare_with_samtools ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- compare_with_samtools stdout ---- [INFO] [stdout] thread 'compare_with_samtools' panicked at 'Cannot load test data', tests/integration_test.rs:70:5 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56472a8fa61b - backtrace::backtrace::libunwind::trace::h89fcc71e59e3bc5b [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.34/src/backtrace/libunwind.rs:88 [INFO] [stdout] 1: 0x56472a8fa61b - backtrace::backtrace::trace_unsynchronized::h0bad9be1379e729a [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.34/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x56472a8fa61b - std::sys_common::backtrace::_print::hd3382a1f33c473da [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:47 [INFO] [stdout] 3: 0x56472a8fa61b - std::sys_common::backtrace::print::h0ec6f03cfb8e76a6 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:36 [INFO] [stdout] 4: 0x56472a8fa61b - std::panicking::default_hook::{{closure}}::h96cbf7b454e3f557 [INFO] [stdout] at src/libstd/panicking.rs:200 [INFO] [stdout] 5: 0x56472a8fa28c - std::panicking::default_hook::h95a8f00337383d83 [INFO] [stdout] at src/libstd/panicking.rs:211 [INFO] [stdout] 6: 0x56472a8fad8d - std::panicking::rust_panic_with_hook::h92f98b46e22f14ed [INFO] [stdout] at src/libstd/panicking.rs:477 [INFO] [stdout] 7: 0x56472a897635 - std::panicking::begin_panic::h730e4802ceeb2d19 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/panicking.rs:411 [INFO] [stdout] 8: 0x56472a895b03 - integration_test::compare_with_samtools::h0a08d95ac781c8c6 [INFO] [stdout] at tests/integration_test.rs:70 [INFO] [stdout] 9: 0x56472a895b03 - integration_test::compare_with_samtools::{{closure}}::h31d708cf58178e4a [INFO] [stdout] at tests/integration_test.rs:68 [INFO] [stdout] 10: 0x56472a895b03 - core::ops::function::FnOnce::call_once::h468d0c9855300263 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libcore/ops/function.rs:235 [INFO] [stdout] 11: 0x56472a8a263f - as core::ops::function::FnOnce>::call_once::hac0fbe2754f8bd24 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/liballoc/boxed.rs:787 [INFO] [stdout] 12: 0x56472a90213a - __rust_maybe_catch_panic [INFO] [stdout] at src/libpanic_unwind/lib.rs:80 [INFO] [stdout] 13: 0x56472a8bcc2e - std::panicking::try::h9d6938917cc05e3f [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/panicking.rs:275 [INFO] [stdout] 14: 0x56472a8bcc2e - std::panic::catch_unwind::h5be70fd1d69515b0 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/panic.rs:394 [INFO] [stdout] 15: 0x56472a8bcc2e - test::run_test::run_test_inner::{{closure}}::h056f206eafd8ff6e [INFO] [stdout] at src/libtest/lib.rs:1408 [INFO] [stdout] 16: 0x56472a898065 - std::sys_common::backtrace::__rust_begin_short_backtrace::h859abbc742a34b19 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/sys_common/backtrace.rs:77 [INFO] [stdout] 17: 0x56472a89c1a5 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::hf8192ec938c43694 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/thread/mod.rs:470 [INFO] [stdout] 18: 0x56472a89c1a5 - as core::ops::function::FnOnce<()>>::call_once::hae7b2431555cb4db [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/panic.rs:315 [INFO] [stdout] 19: 0x56472a89c1a5 - std::panicking::try::do_call::h6da7ecd0783259d7 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/panicking.rs:296 [INFO] [stdout] 20: 0x56472a90213a - __rust_maybe_catch_panic [INFO] [stdout] at src/libpanic_unwind/lib.rs:80 [INFO] [stdout] 21: 0x56472a89c782 - std::panicking::try::h3c1c35414c2c78f1 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/panicking.rs:275 [INFO] [stdout] 22: 0x56472a89c782 - std::panic::catch_unwind::ha5cfb2018fda983e [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/panic.rs:394 [INFO] [stdout] 23: 0x56472a89c782 - std::thread::Builder::spawn_unchecked::{{closure}}::hc7620e41f0938c09 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libstd/thread/mod.rs:469 [INFO] [stdout] 24: 0x56472a89c782 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h1b3b20eeb6ea6ddd [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/libcore/ops/function.rs:235 [INFO] [stdout] 25: 0x56472a8ee9af - as core::ops::function::FnOnce>::call_once::h2877b2aefb0fd627 [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/liballoc/boxed.rs:787 [INFO] [stdout] 26: 0x56472a901510 - as core::ops::function::FnOnce>::call_once::h13f473dbcdaa0fef [INFO] [stdout] at /rustc/625451e376bb2e5283fc4741caa0a3e8a2ca4d54/src/liballoc/boxed.rs:787 [INFO] [stdout] 27: 0x56472a901510 - std::sys_common::thread::start_thread::h562a7c4953cb1d31 [INFO] [stdout] at src/libstd/sys_common/thread.rs:13 [INFO] [stdout] 28: 0x56472a901510 - std::sys::unix::thread::Thread::new::thread_start::h382c6ae14181d163 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:79 [INFO] [stdout] 29: 0x7f59b13916db - start_thread [INFO] [stdout] 30: 0x7f59b1a6888f - __clone [INFO] [stdout] 31: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] compare_with_samtools [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--test integration_test' [INFO] running `"docker" "inspect" "18508194f6a970b86bc291f8e54f39dbc7f5f21dc0a2fce71e8a21ee8259ca41"` [INFO] running `"docker" "rm" "-f" "18508194f6a970b86bc291f8e54f39dbc7f5f21dc0a2fce71e8a21ee8259ca41"` [INFO] [stdout] 18508194f6a970b86bc291f8e54f39dbc7f5f21dc0a2fce71e8a21ee8259ca41