[INFO] crate bamrescue 0.1.0 is already in cache [INFO] extracting crate bamrescue 0.1.0 into work/ex/beta-1.38-1/sources/1.37.0/reg/bamrescue/0.1.0 [INFO] extracting crate bamrescue 0.1.0 into work/ex/beta-1.38-1/sources/beta-2019-08-13/reg/bamrescue/0.1.0 [INFO] validating manifest of bamrescue-0.1.0 on toolchain 1.37.0 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of bamrescue-0.1.0 on toolchain beta-2019-08-13 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing bamrescue-0.1.0 [INFO] finished frobbing bamrescue-0.1.0 [INFO] frobbed toml for bamrescue-0.1.0 written to work/ex/beta-1.38-1/sources/1.37.0/reg/bamrescue/0.1.0/Cargo.toml [INFO] started frobbing bamrescue-0.1.0 [INFO] finished frobbing bamrescue-0.1.0 [INFO] frobbed toml for bamrescue-0.1.0 written to work/ex/beta-1.38-1/sources/beta-2019-08-13/reg/bamrescue/0.1.0/Cargo.toml [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] testing bamrescue-0.1.0 against beta-2019-08-13 for beta-1.38-1 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-4/beta-2019-08-13:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/beta-2019-08-13/reg/bamrescue/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-08-13" "build" "--frozen"` [INFO] [stdout] c34383d93ad502e599b7091bef9748db248e646dc700890c758fc40d5687b797 [INFO] running `"docker" "start" "-a" "c34383d93ad502e599b7091bef9748db248e646dc700890c758fc40d5687b797"` [INFO] [stderr] Compiling slog-term v2.4.1 [INFO] [stderr] Compiling bamrescue v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:72:33 [INFO] [stderr] | [INFO] [stderr] 72 | fn seek_next_block(reader: &mut Rescuable, block_position: u64) { [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn Rescuable` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:178:27 [INFO] [stderr] | [INFO] [stderr] 178 | pub fn check(reader: &mut Rescuable, fail_fast: bool, threads: usize, logger: &slog::Logger) -> Results { [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn Rescuable` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:449:28 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn Rescuable` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:449:52 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Write` [INFO] [stderr] [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:209:66 [INFO] [stderr] | [INFO] [stderr] 209 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_assignments)]` on by default [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:420:62 [INFO] [stderr] | [INFO] [stderr] 420 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: unused variable: `reader` [INFO] [stderr] --> src/lib.rs:449:15 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_reader` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `writer` [INFO] [stderr] --> src/lib.rs:449:39 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_writer` [INFO] [stderr] [INFO] [stderr] warning: field is never used: `header_bytes` [INFO] [stderr] --> src/lib.rs:51:5 [INFO] [stderr] | [INFO] [stderr] 51 | header_bytes: Vec, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 9.45s [INFO] running `"docker" "inspect" "c34383d93ad502e599b7091bef9748db248e646dc700890c758fc40d5687b797"` [INFO] running `"docker" "rm" "-f" "c34383d93ad502e599b7091bef9748db248e646dc700890c758fc40d5687b797"` [INFO] [stdout] c34383d93ad502e599b7091bef9748db248e646dc700890c758fc40d5687b797 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-4/beta-2019-08-13:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/beta-2019-08-13/reg/bamrescue/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-08-13" "test" "--frozen" "--no-run"` [INFO] [stdout] 12d8cde4d233b19ae36f2e65652a8ae82f645b12f790b878b35e38b1c105ed87 [INFO] running `"docker" "start" "-a" "12d8cde4d233b19ae36f2e65652a8ae82f645b12f790b878b35e38b1c105ed87"` [INFO] [stderr] Compiling bamrescue v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:72:33 [INFO] [stderr] | [INFO] [stderr] 72 | fn seek_next_block(reader: &mut Rescuable, block_position: u64) { [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn Rescuable` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:178:27 [INFO] [stderr] | [INFO] [stderr] 178 | pub fn check(reader: &mut Rescuable, fail_fast: bool, threads: usize, logger: &slog::Logger) -> Results { [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn Rescuable` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:449:28 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^^^^ help: use `dyn`: `dyn Rescuable` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> src/lib.rs:449:52 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^ help: use `dyn`: `dyn Write` [INFO] [stderr] [INFO] [stderr] warning: trait objects without an explicit `dyn` are deprecated [INFO] [stderr] --> tests/check.rs:11:23 [INFO] [stderr] | [INFO] [stderr] 11 | fn check(reader: &mut bamrescue::Rescuable, blocks_count: u64, bad_blocks_count: u64, truncated_in_block: bool, truncated_between_blocks: bool) { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^ help: use `dyn`: `dyn bamrescue::Rescuable` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(bare_trait_objects)]` on by default [INFO] [stderr] [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:209:66 [INFO] [stderr] | [INFO] [stderr] 209 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_assignments)]` on by default [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:420:62 [INFO] [stderr] | [INFO] [stderr] 420 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: unused variable: `reader` [INFO] [stderr] --> src/lib.rs:449:15 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_reader` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `writer` [INFO] [stderr] --> src/lib.rs:449:39 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_writer` [INFO] [stderr] [INFO] [stderr] warning: field is never used: `header_bytes` [INFO] [stderr] --> src/lib.rs:51:5 [INFO] [stderr] | [INFO] [stderr] 51 | header_bytes: Vec, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.35s [INFO] running `"docker" "inspect" "12d8cde4d233b19ae36f2e65652a8ae82f645b12f790b878b35e38b1c105ed87"` [INFO] running `"docker" "rm" "-f" "12d8cde4d233b19ae36f2e65652a8ae82f645b12f790b878b35e38b1c105ed87"` [INFO] [stdout] 12d8cde4d233b19ae36f2e65652a8ae82f645b12f790b878b35e38b1c105ed87 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-4/beta-2019-08-13:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/beta-2019-08-13/reg/bamrescue/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-08-13" "test" "--frozen"` [INFO] [stdout] edd615df163462171801035fa9816a305903e8548e9abd3ebe21e49ed4362e72 [INFO] running `"docker" "start" "-a" "edd615df163462171801035fa9816a305903e8548e9abd3ebe21e49ed4362e72"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stderr] Running /opt/crater/target/debug/deps/bamrescue-422e9e2b62b4d1d8 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/crater/target/debug/deps/bamrescue-ad0bb5d8fd840545 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/crater/target/debug/deps/check-3b99fc716821ffbd [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/crater/target/debug/deps/version-4e27368e972d8d0d [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test version ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests bamrescue [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "edd615df163462171801035fa9816a305903e8548e9abd3ebe21e49ed4362e72"` [INFO] running `"docker" "rm" "-f" "edd615df163462171801035fa9816a305903e8548e9abd3ebe21e49ed4362e72"` [INFO] [stdout] edd615df163462171801035fa9816a305903e8548e9abd3ebe21e49ed4362e72