[INFO] updating cached repository xeranimus/mergebg [INFO] running `"git" "fetch" "--all"` [INFO] [stdout] Fetching origin [INFO] [stderr] From git://github.com/xeranimus/mergebg [INFO] [stderr] * branch HEAD -> FETCH_HEAD [INFO] running `"git" "clone" "work/cache/sources/gh/xeranimus/mergebg" "work/ex/beta-1.38-1/sources/1.37.0/gh/xeranimus/mergebg"` [INFO] [stderr] Cloning into 'work/ex/beta-1.38-1/sources/1.37.0/gh/xeranimus/mergebg'... [INFO] [stderr] done. [INFO] running `"git" "clone" "work/cache/sources/gh/xeranimus/mergebg" "work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/xeranimus/mergebg"` [INFO] [stderr] Cloning into 'work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/xeranimus/mergebg'... [INFO] [stderr] done. [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] 603295c617318981a18517c853172ffd313cfe8d [INFO] sha for GitHub repo xeranimus/mergebg: 603295c617318981a18517c853172ffd313cfe8d [INFO] validating manifest of xeranimus/mergebg on toolchain 1.37.0 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of xeranimus/mergebg on toolchain beta-2019-08-13 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing xeranimus/mergebg [INFO] finished frobbing xeranimus/mergebg [INFO] frobbed toml for xeranimus/mergebg written to work/ex/beta-1.38-1/sources/1.37.0/gh/xeranimus/mergebg/Cargo.toml [INFO] started frobbing xeranimus/mergebg [INFO] finished frobbing xeranimus/mergebg [INFO] frobbed toml for xeranimus/mergebg written to work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/xeranimus/mergebg/Cargo.toml [INFO] crate xeranimus/mergebg already has a lockfile, it will not be regenerated [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] testing xeranimus/mergebg against beta-2019-08-13 for beta-1.38-1 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-0/beta-2019-08-13:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/xeranimus/mergebg:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-08-13" "build" "--frozen"` [INFO] [stdout] 3ddaca4e4a04fd3708a8358200218a601af24be085c25166d58ca5e44904eb58 [INFO] running `"docker" "start" "-a" "3ddaca4e4a04fd3708a8358200218a601af24be085c25166d58ca5e44904eb58"` [INFO] [stderr] Compiling mergebg v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:108:33 [INFO] [stderr] | [INFO] [stderr] 108 | fn starts_before(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:113:30 [INFO] [stderr] | [INFO] [stderr] 113 | fn ends_after(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:118:39 [INFO] [stderr] | [INFO] [stderr] 118 | fn truncate_before(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:123:38 [INFO] [stderr] | [INFO] [stderr] 123 | fn truncate_after(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] [INFO] [stderr] warning: method is never used: `start_pos` [INFO] [stderr] --> src/lib.rs:21:9 [INFO] [stderr] | [INFO] [stderr] 21 | fn start_pos(&self) -> ChromPos { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: method is never used: `stop_pos` [INFO] [stderr] --> src/lib.rs:25:9 [INFO] [stderr] | [INFO] [stderr] 25 | fn stop_pos(&self) -> ChromPos { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method is never used: `starts_before` [INFO] [stderr] --> src/lib.rs:108:9 [INFO] [stderr] | [INFO] [stderr] 108 | fn starts_before(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method is never used: `ends_after` [INFO] [stderr] --> src/lib.rs:113:9 [INFO] [stderr] | [INFO] [stderr] 113 | fn ends_after(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method is never used: `truncate_before` [INFO] [stderr] --> src/lib.rs:118:9 [INFO] [stderr] | [INFO] [stderr] 118 | fn truncate_before(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method is never used: `truncate_after` [INFO] [stderr] --> src/lib.rs:123:9 [INFO] [stderr] | [INFO] [stderr] 123 | fn truncate_after(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::fmt` [INFO] [stderr] --> src/main.rs:1:5 [INFO] [stderr] | [INFO] [stderr] 1 | use std::fmt; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::fs::File` [INFO] [stderr] --> src/main.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use std::fs::File; [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused imports: `BufRead`, `BufReader` [INFO] [stderr] --> src/main.rs:3:15 [INFO] [stderr] | [INFO] [stderr] 3 | use std::io::{BufRead, BufReader}; [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2.07s [INFO] running `"docker" "inspect" "3ddaca4e4a04fd3708a8358200218a601af24be085c25166d58ca5e44904eb58"` [INFO] running `"docker" "rm" "-f" "3ddaca4e4a04fd3708a8358200218a601af24be085c25166d58ca5e44904eb58"` [INFO] [stdout] 3ddaca4e4a04fd3708a8358200218a601af24be085c25166d58ca5e44904eb58 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-0/beta-2019-08-13:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/xeranimus/mergebg:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-08-13" "test" "--frozen" "--no-run"` [INFO] [stdout] c852edd80599cbea83d9d0b759433a88ff37f6ddb6d3c7c005264ced5bc49dfc [INFO] running `"docker" "start" "-a" "c852edd80599cbea83d9d0b759433a88ff37f6ddb6d3c7c005264ced5bc49dfc"` [INFO] [stderr] Compiling mergebg v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:108:33 [INFO] [stderr] | [INFO] [stderr] 108 | fn starts_before(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:113:30 [INFO] [stderr] | [INFO] [stderr] 113 | fn ends_after(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:118:39 [INFO] [stderr] | [INFO] [stderr] 118 | fn truncate_before(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `pos` [INFO] [stderr] --> src/lib.rs:123:38 [INFO] [stderr] | [INFO] [stderr] 123 | fn truncate_after(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^ help: consider prefixing with an underscore: `_pos` [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/lib.rs:190:17 [INFO] [stderr] | [INFO] [stderr] 190 | let mut bedgraph = BedGraphIterator::new("test/unionbedg/1+2+3.bg").unwrap(); [INFO] [stderr] | ----^^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: method is never used: `starts_before` [INFO] [stderr] --> src/lib.rs:108:9 [INFO] [stderr] | [INFO] [stderr] 108 | fn starts_before(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: method is never used: `ends_after` [INFO] [stderr] --> src/lib.rs:113:9 [INFO] [stderr] | [INFO] [stderr] 113 | fn ends_after(&self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method is never used: `truncate_before` [INFO] [stderr] --> src/lib.rs:118:9 [INFO] [stderr] | [INFO] [stderr] 118 | fn truncate_before(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method is never used: `truncate_after` [INFO] [stderr] --> src/lib.rs:123:9 [INFO] [stderr] | [INFO] [stderr] 123 | fn truncate_after(&mut self, pos: &chrom_geo::ChromPos) -> bool { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::fmt` [INFO] [stderr] --> src/main.rs:1:5 [INFO] [stderr] | [INFO] [stderr] 1 | use std::fmt; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::fs::File` [INFO] [stderr] --> src/main.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use std::fs::File; [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused imports: `BufRead`, `BufReader` [INFO] [stderr] --> src/main.rs:3:15 [INFO] [stderr] | [INFO] [stderr] 3 | use std::io::{BufRead, BufReader}; [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2.16s [INFO] running `"docker" "inspect" "c852edd80599cbea83d9d0b759433a88ff37f6ddb6d3c7c005264ced5bc49dfc"` [INFO] running `"docker" "rm" "-f" "c852edd80599cbea83d9d0b759433a88ff37f6ddb6d3c7c005264ced5bc49dfc"` [INFO] [stdout] c852edd80599cbea83d9d0b759433a88ff37f6ddb6d3c7c005264ced5bc49dfc [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-0/beta-2019-08-13:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/xeranimus/mergebg:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-08-13" "test" "--frozen"` [INFO] [stdout] 04fd627d57ff890e6d6ae2121a0b48d0b1d9de1e5db9875fe20fadebaa7a638b [INFO] running `"docker" "start" "-a" "04fd627d57ff890e6d6ae2121a0b48d0b1d9de1e5db9875fe20fadebaa7a638b"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.04s [INFO] [stderr] Running /opt/crater/target/debug/deps/mergebg-f60dcd9958edd0ca [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test bedgraph::test_bedgraph::line_count ... ok [INFO] [stdout] test bedgraph::test_bedgraph::iterator_next ... ok [INFO] [stdout] test chrom_geo::chrom_geo_tests::sort ... ok [INFO] [stdout] test chrom_geo::chrom_geo_tests::min_max ... ok [INFO] [stdout] test chrom_geo::chrom_geo_tests::start_stop ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Running /opt/crater/target/debug/deps/mergebg-6c8f0056e38f7ed2 [INFO] [stdout] running 0 tests [INFO] [stderr] Doc-tests mergebg [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "04fd627d57ff890e6d6ae2121a0b48d0b1d9de1e5db9875fe20fadebaa7a638b"` [INFO] running `"docker" "rm" "-f" "04fd627d57ff890e6d6ae2121a0b48d0b1d9de1e5db9875fe20fadebaa7a638b"` [INFO] [stdout] 04fd627d57ff890e6d6ae2121a0b48d0b1d9de1e5db9875fe20fadebaa7a638b