[INFO] crate rust-bio-tools 0.5.0 is already in cache [INFO] extracting crate rust-bio-tools 0.5.0 into work/ex/beta-1.38-1/sources/1.37.0/reg/rust-bio-tools/0.5.0 [INFO] extracting crate rust-bio-tools 0.5.0 into work/ex/beta-1.38-1/sources/beta-2019-08-13/reg/rust-bio-tools/0.5.0 [INFO] validating manifest of rust-bio-tools-0.5.0 on toolchain 1.37.0 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of rust-bio-tools-0.5.0 on toolchain beta-2019-08-13 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing rust-bio-tools-0.5.0 [INFO] finished frobbing rust-bio-tools-0.5.0 [INFO] frobbed toml for rust-bio-tools-0.5.0 written to work/ex/beta-1.38-1/sources/1.37.0/reg/rust-bio-tools/0.5.0/Cargo.toml [INFO] started frobbing rust-bio-tools-0.5.0 [INFO] finished frobbing rust-bio-tools-0.5.0 [INFO] frobbed toml for rust-bio-tools-0.5.0 written to work/ex/beta-1.38-1/sources/beta-2019-08-13/reg/rust-bio-tools/0.5.0/Cargo.toml [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] testing rust-bio-tools-0.5.0 against 1.37.0 for beta-1.38-1 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-6/1.37.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/1.37.0/reg/rust-bio-tools/0.5.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.37.0" "build" "--frozen"` [INFO] [stdout] 48cd6eccacefcf68fb5bec5241b936e9a56c8ff6aa511262ffbf19aa429386ea [INFO] running `"docker" "start" "-a" "48cd6eccacefcf68fb5bec5241b936e9a56c8ff6aa511262ffbf19aa429386ea"` [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling bindgen v0.49.2 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling bindgen v0.51.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Compiling void v1.0.2 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling c_vec v1.0.12 [INFO] [stderr] Compiling order-stat v0.1.3 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling lock_api v0.3.1 [INFO] [stderr] Compiling itertools v0.6.5 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling GSL v1.1.0 [INFO] [stderr] Compiling unreachable v1.0.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling cogset v0.2.0 [INFO] [stderr] Compiling clang-sys v0.28.1 [INFO] [stderr] Compiling parking_lot_core v0.6.2 [INFO] [stderr] Compiling parking_lot v0.9.0 [INFO] [stderr] Compiling clicolors-control v1.0.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling regex-automata v0.1.8 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling number_prefix v0.2.8 [INFO] [stderr] Compiling streaming-stats v0.2.2 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling ordered-float v0.5.2 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bstr v0.2.7 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling backtrace-sys v0.1.31 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling regex v1.2.1 [INFO] [stderr] Compiling backtrace v0.3.35 [INFO] [stderr] Compiling flate2 v1.0.11 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Compiling which v2.0.1 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling console v0.7.7 [INFO] [stderr] Compiling indicatif v0.11.0 [INFO] [stderr] Compiling librocksdb-sys v6.1.2 [INFO] [stderr] Compiling rust-htslib v0.23.0 [ERROR] error running command: no output for 300 seconds [INFO] running `"docker" "inspect" "48cd6eccacefcf68fb5bec5241b936e9a56c8ff6aa511262ffbf19aa429386ea"` [INFO] running `"docker" "rm" "-f" "48cd6eccacefcf68fb5bec5241b936e9a56c8ff6aa511262ffbf19aa429386ea"` [INFO] [stdout] 48cd6eccacefcf68fb5bec5241b936e9a56c8ff6aa511262ffbf19aa429386ea