[INFO] updating cached repository jstjohn/rust-seqprep [INFO] running `"git" "fetch" "--all"` [INFO] [stdout] Fetching origin [INFO] [stderr] From git://github.com/jstjohn/rust-seqprep [INFO] [stderr] * branch HEAD -> FETCH_HEAD [INFO] running `"git" "clone" "work/cache/sources/gh/jstjohn/rust-seqprep" "work/ex/beta-1.38-1/sources/1.37.0/gh/jstjohn/rust-seqprep"` [INFO] [stderr] Cloning into 'work/ex/beta-1.38-1/sources/1.37.0/gh/jstjohn/rust-seqprep'... [INFO] [stderr] done. [INFO] running `"git" "clone" "work/cache/sources/gh/jstjohn/rust-seqprep" "work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/jstjohn/rust-seqprep"` [INFO] [stderr] Cloning into 'work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/jstjohn/rust-seqprep'... [INFO] [stderr] done. [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] e907892c1fd1870f41e72312dd2379b1b074aee0 [INFO] sha for GitHub repo jstjohn/rust-seqprep: e907892c1fd1870f41e72312dd2379b1b074aee0 [INFO] validating manifest of jstjohn/rust-seqprep on toolchain 1.37.0 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of jstjohn/rust-seqprep on toolchain beta-2019-08-13 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing jstjohn/rust-seqprep [INFO] finished frobbing jstjohn/rust-seqprep [INFO] frobbed toml for jstjohn/rust-seqprep written to work/ex/beta-1.38-1/sources/1.37.0/gh/jstjohn/rust-seqprep/Cargo.toml [INFO] started frobbing jstjohn/rust-seqprep [INFO] finished frobbing jstjohn/rust-seqprep [INFO] frobbed toml for jstjohn/rust-seqprep written to work/ex/beta-1.38-1/sources/beta-2019-08-13/gh/jstjohn/rust-seqprep/Cargo.toml [INFO] crate jstjohn/rust-seqprep already has a lockfile, it will not be regenerated [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] [stderr] error: the lock file /mnt/big/crater/work/ex/beta-1.38-1/sources/1.37.0/gh/jstjohn/rust-seqprep/Cargo.lock needs to be updated but --locked was passed to prevent this [INFO] the lockfile is outdated, regenerating it [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.37.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-08-13" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] testing jstjohn/rust-seqprep against 1.37.0 for beta-1.38-1 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-2/1.37.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/1.37.0/gh/jstjohn/rust-seqprep:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.37.0" "build" "--frozen"` [INFO] [stdout] 5c91beb8f37faa919eeec9fc13408f34bd07cfc8664095a1754ae14cb045dd28 [INFO] running `"docker" "start" "-a" "5c91beb8f37faa919eeec9fc13408f34bd07cfc8664095a1754ae14cb045dd28"` [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling bio v0.28.2 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling strum v0.13.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling serde v1.0.99 [INFO] [stderr] Compiling strum_macros v0.13.0 [INFO] [stderr] Compiling bstr v0.2.7 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling rust-seqprep v0.1.0 (/opt/crater/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 10s [INFO] running `"docker" "inspect" "5c91beb8f37faa919eeec9fc13408f34bd07cfc8664095a1754ae14cb045dd28"` [INFO] running `"docker" "rm" "-f" "5c91beb8f37faa919eeec9fc13408f34bd07cfc8664095a1754ae14cb045dd28"` [INFO] [stdout] 5c91beb8f37faa919eeec9fc13408f34bd07cfc8664095a1754ae14cb045dd28 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-2/1.37.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/1.37.0/gh/jstjohn/rust-seqprep:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.37.0" "test" "--frozen" "--no-run"` [INFO] [stdout] 0c6195f69122fdeb780c4f3707a2a8543f16a22c6c8a03ab2d20e8a6424e17eb [INFO] running `"docker" "start" "-a" "0c6195f69122fdeb780c4f3707a2a8543f16a22c6c8a03ab2d20e8a6424e17eb"` [INFO] [stderr] Compiling rust-seqprep v0.1.0 (/opt/crater/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1.32s [INFO] running `"docker" "inspect" "0c6195f69122fdeb780c4f3707a2a8543f16a22c6c8a03ab2d20e8a6424e17eb"` [INFO] running `"docker" "rm" "-f" "0c6195f69122fdeb780c4f3707a2a8543f16a22c6c8a03ab2d20e8a6424e17eb"` [INFO] [stdout] 0c6195f69122fdeb780c4f3707a2a8543f16a22c6c8a03ab2d20e8a6424e17eb [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.38-1/worker-2/1.37.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.38-1/sources/1.37.0/gh/jstjohn/rust-seqprep:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.37.0" "test" "--frozen"` [INFO] [stdout] f3af0af3928d9922b221805fdfc16aaa7a05c8c0a03427cb7a8621f1a97139cd [INFO] running `"docker" "start" "-a" "f3af0af3928d9922b221805fdfc16aaa7a05c8c0a03427cb7a8621f1a97139cd"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.08s [INFO] [stderr] Running /opt/crater/target/debug/deps/rust_seqprep-5a47510460d2a3f4 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "f3af0af3928d9922b221805fdfc16aaa7a05c8c0a03427cb7a8621f1a97139cd"` [INFO] running `"docker" "rm" "-f" "f3af0af3928d9922b221805fdfc16aaa7a05c8c0a03427cb7a8621f1a97139cd"` [INFO] [stdout] f3af0af3928d9922b221805fdfc16aaa7a05c8c0a03427cb7a8621f1a97139cd