[INFO] updating cached repository zaeleus/noodles-fpkm
[INFO] running `"git" "fetch" "--all"`
[INFO] [stdout] Fetching origin
[INFO] [stderr] From git://github.com/zaeleus/noodles-fpkm
[INFO] [stderr]  * branch            HEAD       -> FETCH_HEAD
[INFO] running `"git" "clone" "work/cache/sources/gh/zaeleus/noodles-fpkm" "work/ex/beta-1.37-6/sources/1.36.0/gh/zaeleus/noodles-fpkm"`
[INFO] [stderr] Cloning into 'work/ex/beta-1.37-6/sources/1.36.0/gh/zaeleus/noodles-fpkm'...
[INFO] [stderr] done.
[INFO] running `"git" "clone" "work/cache/sources/gh/zaeleus/noodles-fpkm" "work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/zaeleus/noodles-fpkm"`
[INFO] [stderr] Cloning into 'work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/zaeleus/noodles-fpkm'...
[INFO] [stderr] done.
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] 16fcd4da35d307ff5db175b605e8b5494aec9cd3
[INFO] sha for GitHub repo zaeleus/noodles-fpkm: 16fcd4da35d307ff5db175b605e8b5494aec9cd3
[INFO] validating manifest of zaeleus/noodles-fpkm on toolchain 1.36.0
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] validating manifest of zaeleus/noodles-fpkm on toolchain beta-2019-07-23
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started frobbing zaeleus/noodles-fpkm
[INFO] finished frobbing zaeleus/noodles-fpkm
[INFO] frobbed toml for zaeleus/noodles-fpkm written to work/ex/beta-1.37-6/sources/1.36.0/gh/zaeleus/noodles-fpkm/Cargo.toml
[INFO] started frobbing zaeleus/noodles-fpkm
[INFO] finished frobbing zaeleus/noodles-fpkm
[INFO] frobbed toml for zaeleus/noodles-fpkm written to work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/zaeleus/noodles-fpkm/Cargo.toml
[INFO] crate zaeleus/noodles-fpkm already has a lockfile, it will not be regenerated
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] testing zaeleus/noodles-fpkm against beta-2019-07-23 for beta-1.37-6
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-5/beta-2019-07-23:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/zaeleus/noodles-fpkm:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-07-23" "build" "--frozen"`
[INFO] [stdout] 55317611392d1b67021175f80b577e2c6ce23e6af4f335616b6b381df5ed77f4
[INFO] running `"docker" "start" "-a" "55317611392d1b67021175f80b577e2c6ce23e6af4f335616b6b381df5ed77f4"`
[INFO] [stderr]    Compiling libc v0.2.47
[INFO] [stderr]    Compiling cc v1.0.28
[INFO] [stderr]    Compiling serde v1.0.84
[INFO] [stderr]    Compiling regex v1.1.0
[INFO] [stderr]    Compiling utf8-ranges v1.0.2
[INFO] [stderr]    Compiling strsim v0.7.0
[INFO] [stderr]    Compiling termcolor v1.0.4
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling regex-syntax v0.6.4
[INFO] [stderr]    Compiling humantime v1.2.0
[INFO] [stderr]    Compiling textwrap v0.10.0
[INFO] [stderr]    Compiling crc32fast v1.1.2
[INFO] [stderr]    Compiling miniz-sys v0.1.11
[INFO] [stderr]    Compiling memchr v2.1.2
[INFO] [stderr]    Compiling atty v0.2.11
[INFO] [stderr]    Compiling clap v2.32.0
[INFO] [stderr]    Compiling flate2 v1.0.6
[INFO] [stderr]    Compiling csv-core v0.1.5
[INFO] [stderr]    Compiling aho-corasick v0.6.9
[INFO] [stderr]    Compiling env_logger v0.6.0
[INFO] [stderr]    Compiling csv v1.0.5
[INFO] [stderr]    Compiling noodles v0.1.0 (https://github.com/zaeleus/noodles.git#521009a6)
[INFO] [stderr]    Compiling noodles-fpkm v0.1.0 (/opt/crater/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 50.97s
[INFO] running `"docker" "inspect" "55317611392d1b67021175f80b577e2c6ce23e6af4f335616b6b381df5ed77f4"`
[INFO] running `"docker" "rm" "-f" "55317611392d1b67021175f80b577e2c6ce23e6af4f335616b6b381df5ed77f4"`
[INFO] [stdout] 55317611392d1b67021175f80b577e2c6ce23e6af4f335616b6b381df5ed77f4
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-5/beta-2019-07-23:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/zaeleus/noodles-fpkm:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-07-23" "test" "--frozen" "--no-run"`
[INFO] [stdout] 6531c4ba65f1248912a2b073f38d496ffcfc7e7ec98d5145f978f012cccd4acb
[INFO] running `"docker" "start" "-a" "6531c4ba65f1248912a2b073f38d496ffcfc7e7ec98d5145f978f012cccd4acb"`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling noodles-fpkm v0.1.0 (/opt/crater/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3.70s
[INFO] running `"docker" "inspect" "6531c4ba65f1248912a2b073f38d496ffcfc7e7ec98d5145f978f012cccd4acb"`
[INFO] running `"docker" "rm" "-f" "6531c4ba65f1248912a2b073f38d496ffcfc7e7ec98d5145f978f012cccd4acb"`
[INFO] [stdout] 6531c4ba65f1248912a2b073f38d496ffcfc7e7ec98d5145f978f012cccd4acb
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-5/beta-2019-07-23:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/zaeleus/noodles-fpkm:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-07-23" "test" "--frozen"`
[INFO] [stdout] 921c9c6dd4017f85715aa2572e3bbadfe3b4e386e6ebd4abb53b413ff7bacd45
[INFO] running `"docker" "start" "-a" "921c9c6dd4017f85715aa2572e3bbadfe3b4e386e6ebd4abb53b413ff7bacd45"`
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 0.09s
[INFO] [stderr]      Running /opt/crater/target/debug/deps/noodles_fpkm-cd21becd6f9c8427
[INFO] [stdout] 
[INFO] [stdout] running 10 tests
[INFO] [stdout] test tests::test_calculate_fpkms_is_ordered_by_feature_id ... ok
[INFO] [stdout] test tests::test_calculate_fpkms_with_missing_feature ... ok
[INFO] [stdout] test tests::test_calculate_fpkms ... ok
[INFO] [stdout] test tests::test_calculate_fpkm ... ok
[INFO] [stdout] test counts::tests::test_read_counts_with_duplicate_identifiers ... ok
[INFO] [stdout] test tests::test_calculate_tpm ... ok
[INFO] [stdout] test counts::tests::test_parse_name ... ok
[INFO] [stdout] test tests::test_sum_nonoverlapping_interval_lengths ... ok
[INFO] [stderr]      Running /opt/crater/target/debug/deps/noodles_fpkm-83d6a02bb5459000
[INFO] [stdout] test counts::tests::test_parse_count ... ok
[INFO] [stdout] test counts::tests::test_insert_count ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test tests::test_write_expressions ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests noodles-fpkm
[INFO] [stdout] 
[INFO] [stdout] running 5 tests
[INFO] [stdout] test src/features.rs - features::Feature::len (line 23) ... ok
[INFO] [stdout] test src/counts.rs - counts::sum_counts (line 109) ... ok
[INFO] [stdout] test src/features.rs - features::merge_intervals (line 56) ... ok
[INFO] [stdout] test src/features.rs - features::read_features (line 103) ... ok
[INFO] [stdout] test src/counts.rs - counts::read_counts (line 28) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `"docker" "inspect" "921c9c6dd4017f85715aa2572e3bbadfe3b4e386e6ebd4abb53b413ff7bacd45"`
[INFO] running `"docker" "rm" "-f" "921c9c6dd4017f85715aa2572e3bbadfe3b4e386e6ebd4abb53b413ff7bacd45"`
[INFO] [stdout] 921c9c6dd4017f85715aa2572e3bbadfe3b4e386e6ebd4abb53b413ff7bacd45