[INFO] updating cached repository ryanobeirne/cgats [INFO] running `"git" "fetch" "--all"` [INFO] [stdout] Fetching origin [INFO] [stderr] From git://github.com/ryanobeirne/cgats [INFO] [stderr] * branch HEAD -> FETCH_HEAD [INFO] running `"git" "clone" "work/cache/sources/gh/ryanobeirne/cgats" "work/ex/beta-1.37-6/sources/1.36.0/gh/ryanobeirne/cgats"` [INFO] [stderr] Cloning into 'work/ex/beta-1.37-6/sources/1.36.0/gh/ryanobeirne/cgats'... [INFO] [stderr] done. [INFO] running `"git" "clone" "work/cache/sources/gh/ryanobeirne/cgats" "work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/ryanobeirne/cgats"` [INFO] [stderr] Cloning into 'work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/ryanobeirne/cgats'... [INFO] [stderr] done. [INFO] running `"git" "rev-parse" "HEAD"` [INFO] [stdout] a59db426416bb7f0054a4de0c3d74926a28aff2a [INFO] sha for GitHub repo ryanobeirne/cgats: a59db426416bb7f0054a4de0c3d74926a28aff2a [INFO] validating manifest of ryanobeirne/cgats on toolchain 1.36.0 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of ryanobeirne/cgats on toolchain beta-2019-07-23 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing ryanobeirne/cgats [INFO] removed 0 missing examples [INFO] finished frobbing ryanobeirne/cgats [INFO] frobbed toml for ryanobeirne/cgats written to work/ex/beta-1.37-6/sources/1.36.0/gh/ryanobeirne/cgats/Cargo.toml [INFO] started frobbing ryanobeirne/cgats [INFO] removed 0 missing examples [INFO] finished frobbing ryanobeirne/cgats [INFO] frobbed toml for ryanobeirne/cgats written to work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/ryanobeirne/cgats/Cargo.toml [INFO] crate ryanobeirne/cgats already has a lockfile, it will not be regenerated [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] testing ryanobeirne/cgats against beta-2019-07-23 for beta-1.37-6 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-3/beta-2019-07-23:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/ryanobeirne/cgats:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-07-23" "build" "--frozen"` [INFO] [stdout] bbc2468ea5f215f9da4d97e2b45e2658742da0f37c09613c478d4b0d9e96c98a [INFO] running `"docker" "start" "-a" "bbc2468ea5f215f9da4d97e2b45e2658742da0f37c09613c478d4b0d9e96c98a"` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling deltae v0.1.5 [INFO] [stderr] Compiling statistical v1.0.0 [INFO] [stderr] Compiling cgats v0.1.5 (/opt/crater/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3.73s [INFO] running `"docker" "inspect" "bbc2468ea5f215f9da4d97e2b45e2658742da0f37c09613c478d4b0d9e96c98a"` [INFO] running `"docker" "rm" "-f" "bbc2468ea5f215f9da4d97e2b45e2658742da0f37c09613c478d4b0d9e96c98a"` [INFO] [stdout] bbc2468ea5f215f9da4d97e2b45e2658742da0f37c09613c478d4b0d9e96c98a [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-3/beta-2019-07-23:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/ryanobeirne/cgats:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-07-23" "test" "--frozen" "--no-run"` [INFO] [stdout] 09dc031848b160319aad40a5a44b23430aec7c692ef20351d58521485421761c [INFO] running `"docker" "start" "-a" "09dc031848b160319aad40a5a44b23430aec7c692ef20351d58521485421761c"` [INFO] [stderr] Compiling uuid v0.1.18 [INFO] [stderr] Compiling mktemp v0.3.1 [INFO] [stderr] Compiling cgats v0.1.5 (/opt/crater/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 7.40s [INFO] running `"docker" "inspect" "09dc031848b160319aad40a5a44b23430aec7c692ef20351d58521485421761c"` [INFO] running `"docker" "rm" "-f" "09dc031848b160319aad40a5a44b23430aec7c692ef20351d58521485421761c"` [INFO] [stdout] 09dc031848b160319aad40a5a44b23430aec7c692ef20351d58521485421761c [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-3/beta-2019-07-23:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/ryanobeirne/cgats:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+beta-2019-07-23" "test" "--frozen"` [INFO] [stdout] b4f13da28df9209e5d41bc608f5c023283ac82ebb2a69220692f3956c47976d9 [INFO] running `"docker" "start" "-a" "b4f13da28df9209e5d41bc608f5c023283ac82ebb2a69220692f3956c47976d9"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running /opt/crater/target/debug/deps/cgats-abc22fbe19c81bb8 [INFO] [stdout] [INFO] [stdout] running 15 tests [INFO] [stdout] test compare::average_cgats ... ok [INFO] [stdout] test compare::cat_cgats ... ok [INFO] [stdout] test data_vec::from_file ... ok [INFO] [stdout] test cgats::write_data_map ... ok [INFO] [stdout] test cgats::write_fields ... ok [INFO] [stdout] test test::bad_files ... ok [INFO] [stdout] test cgats::write_meta ... ok [INFO] [stdout] test vendor::from_str ... ok [INFO] [stdout] test cgats::cgats_display ... ok [INFO] [stdout] test de_report::de_report ... ok [INFO] [stdout] test compare::deltae ... ok [INFO] [stdout] test compare::reindex ... ok [INFO] [stdout] test compare::average_cb ... ok [INFO] [stdout] test test::good_files ... ok [INFO] [stdout] test test::reconstruct ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 15 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests cgats [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "b4f13da28df9209e5d41bc608f5c023283ac82ebb2a69220692f3956c47976d9"` [INFO] running `"docker" "rm" "-f" "b4f13da28df9209e5d41bc608f5c023283ac82ebb2a69220692f3956c47976d9"` [INFO] [stdout] b4f13da28df9209e5d41bc608f5c023283ac82ebb2a69220692f3956c47976d9