[INFO] crate bamrescue 0.1.0 is already in cache [INFO] extracting crate bamrescue 0.1.0 into work/ex/beta-1.37-6/sources/1.36.0/reg/bamrescue/0.1.0 [INFO] extracting crate bamrescue 0.1.0 into work/ex/beta-1.37-6/sources/beta-2019-07-23/reg/bamrescue/0.1.0 [INFO] validating manifest of bamrescue-0.1.0 on toolchain 1.36.0 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] validating manifest of bamrescue-0.1.0 on toolchain beta-2019-07-23 [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "read-manifest" "--manifest-path" "Cargo.toml"` [INFO] started frobbing bamrescue-0.1.0 [INFO] finished frobbing bamrescue-0.1.0 [INFO] frobbed toml for bamrescue-0.1.0 written to work/ex/beta-1.37-6/sources/1.36.0/reg/bamrescue/0.1.0/Cargo.toml [INFO] started frobbing bamrescue-0.1.0 [INFO] finished frobbing bamrescue-0.1.0 [INFO] frobbed toml for bamrescue-0.1.0 written to work/ex/beta-1.37-6/sources/beta-2019-07-23/reg/bamrescue/0.1.0/Cargo.toml [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "fetch" "--locked" "--manifest-path" "Cargo.toml"` [INFO] testing bamrescue-0.1.0 against 1.36.0 for beta-1.37-6 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-3/1.36.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/1.36.0/reg/bamrescue/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.36.0" "build" "--frozen"` [INFO] [stdout] 6250a9df4b5bcc41fda17a8ce6887528b6885c8852e64ac7d837305cda04a78f [INFO] running `"docker" "start" "-a" "6250a9df4b5bcc41fda17a8ce6887528b6885c8852e64ac7d837305cda04a78f"` [INFO] [stderr] Compiling inflate v0.2.0 [INFO] [stderr] Compiling number_prefix v0.2.8 [INFO] [stderr] Compiling slog-term v2.4.1 [INFO] [stderr] Compiling bamrescue v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:209:66 [INFO] [stderr] | [INFO] [stderr] 209 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_assignments)] on by default [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:420:62 [INFO] [stderr] | [INFO] [stderr] 420 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: unused variable: `reader` [INFO] [stderr] --> src/lib.rs:449:15 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_reader` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_variables)] on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `writer` [INFO] [stderr] --> src/lib.rs:449:39 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_writer` [INFO] [stderr] [INFO] [stderr] warning: field is never used: `header_bytes` [INFO] [stderr] --> src/lib.rs:51:5 [INFO] [stderr] | [INFO] [stderr] 51 | header_bytes: Vec, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(dead_code)] on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 8.29s [INFO] running `"docker" "inspect" "6250a9df4b5bcc41fda17a8ce6887528b6885c8852e64ac7d837305cda04a78f"` [INFO] running `"docker" "rm" "-f" "6250a9df4b5bcc41fda17a8ce6887528b6885c8852e64ac7d837305cda04a78f"` [INFO] [stdout] 6250a9df4b5bcc41fda17a8ce6887528b6885c8852e64ac7d837305cda04a78f [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-3/1.36.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/1.36.0/reg/bamrescue/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.36.0" "test" "--frozen" "--no-run"` [INFO] [stdout] 2a06b2fb53a571bab9a2534460bb47ca72f727ac3e339980a3ac3e9aa6e88672 [INFO] running `"docker" "start" "-a" "2a06b2fb53a571bab9a2534460bb47ca72f727ac3e339980a3ac3e9aa6e88672"` [INFO] [stderr] Compiling bamrescue v0.1.0 (/opt/crater/workdir) [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:209:66 [INFO] [stderr] | [INFO] [stderr] 209 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_assignments)] on by default [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: value assigned to `current_block_corrupted` is never read [INFO] [stderr] --> src/lib.rs:420:62 [INFO] [stderr] | [INFO] [stderr] 420 | fail!(fail_fast, results, previous_block, false, current_block_corrupted, false, false); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: unused variable: `reader` [INFO] [stderr] --> src/lib.rs:449:15 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_reader` [INFO] [stderr] | [INFO] [stderr] = note: #[warn(unused_variables)] on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `writer` [INFO] [stderr] --> src/lib.rs:449:39 [INFO] [stderr] | [INFO] [stderr] 449 | pub fn rescue(reader: &mut Rescuable, writer: &mut Write, logger: &slog::Logger) -> Result<(), Error> { [INFO] [stderr] | ^^^^^^ help: consider prefixing with an underscore: `_writer` [INFO] [stderr] [INFO] [stderr] warning: field is never used: `header_bytes` [INFO] [stderr] --> src/lib.rs:51:5 [INFO] [stderr] | [INFO] [stderr] 51 | header_bytes: Vec, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: #[warn(dead_code)] on by default [INFO] [stderr] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.86s [INFO] running `"docker" "inspect" "2a06b2fb53a571bab9a2534460bb47ca72f727ac3e339980a3ac3e9aa6e88672"` [INFO] running `"docker" "rm" "-f" "2a06b2fb53a571bab9a2534460bb47ca72f727ac3e339980a3ac3e9aa6e88672"` [INFO] [stdout] 2a06b2fb53a571bab9a2534460bb47ca72f727ac3e339980a3ac3e9aa6e88672 [INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-3/1.36.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/1.36.0/reg/bamrescue/0.1.0:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.36.0" "test" "--frozen"` [INFO] [stdout] cb8d7e3064e36f608322c2a3f14720d926d5f92c58a702d125c02114f7bc1bcd [INFO] running `"docker" "start" "-a" "cb8d7e3064e36f608322c2a3f14720d926d5f92c58a702d125c02114f7bc1bcd"` [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stderr] Running /opt/crater/target/debug/deps/bamrescue-f604675cd6747cf0 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/crater/target/debug/deps/bamrescue-59b722382d3f0263 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/crater/target/debug/deps/check-b14b6860ed1e37bf [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test empty_file ... ok [INFO] [stdout] test empty_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test empty_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test single_block_bam ... ok [INFO] [stdout] test empty_with_extra_subfields_after_bam ... ok [INFO] [stdout] test single_block_missing_bgzf_identifier ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_size_bam ... ok [INFO] [stdout] test single_block_missing_gzip_identifier ... ok [INFO] [stdout] test three_blocks_bad_inflated_payload_crc32_bam ... ok [INFO] [stdout] test three_blocks_too_small_bgzf_size_bam ... ok [INFO] [stdout] test single_block_missing_empty_bam ... ok [INFO] [stdout] test three_blocks_too_large_bgzf_size_bam ... ok [INFO] [stdout] test three_blocks_bam ... ok [INFO] [stdout] test three_blocks_empty_inside_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_bam ... ok [INFO] [stdout] test three_blocks_with_extra_similar_subfields_before_and_after_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_after_bam ... ok [INFO] [stdout] test two_blocks_bam ... ok [INFO] [stdout] test three_blocks_with_extra_subfields_before_and_after_bam ... ok [INFO] [stdout] test two_blocks_missing_empty_bam ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/crater/target/debug/deps/version-a8158de54ea3cc97 [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test version ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests bamrescue [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `"docker" "inspect" "cb8d7e3064e36f608322c2a3f14720d926d5f92c58a702d125c02114f7bc1bcd"` [INFO] running `"docker" "rm" "-f" "cb8d7e3064e36f608322c2a3f14720d926d5f92c58a702d125c02114f7bc1bcd"` [INFO] [stdout] cb8d7e3064e36f608322c2a3f14720d926d5f92c58a702d125c02114f7bc1bcd