[INFO] updating cached repository 10XGenomics/bamtofastq
[INFO] running `"git" "fetch" "--all"`
[INFO] [stdout] Fetching origin
[INFO] [stderr] From git://github.com/10XGenomics/bamtofastq
[INFO] [stderr]  * branch            HEAD       -> FETCH_HEAD
[INFO] running `"git" "clone" "work/cache/sources/gh/10XGenomics/bamtofastq" "work/ex/beta-1.37-6/sources/1.36.0/gh/10XGenomics/bamtofastq"`
[INFO] [stderr] Cloning into 'work/ex/beta-1.37-6/sources/1.36.0/gh/10XGenomics/bamtofastq'...
[INFO] [stderr] done.
[INFO] running `"git" "clone" "work/cache/sources/gh/10XGenomics/bamtofastq" "work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/10XGenomics/bamtofastq"`
[INFO] [stderr] Cloning into 'work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/10XGenomics/bamtofastq'...
[INFO] [stderr] done.
[INFO] running `"git" "rev-parse" "HEAD"`
[INFO] [stdout] d3f4aa53a7236e16e59dad5c02f7887eb61ffc28
[INFO] sha for GitHub repo 10XGenomics/bamtofastq: d3f4aa53a7236e16e59dad5c02f7887eb61ffc28
[INFO] validating manifest of 10XGenomics/bamtofastq on toolchain 1.36.0
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] validating manifest of 10XGenomics/bamtofastq on toolchain beta-2019-07-23
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "read-manifest" "--manifest-path" "Cargo.toml"`
[INFO] started frobbing 10XGenomics/bamtofastq
[INFO] finished frobbing 10XGenomics/bamtofastq
[INFO] frobbed toml for 10XGenomics/bamtofastq written to work/ex/beta-1.37-6/sources/1.36.0/gh/10XGenomics/bamtofastq/Cargo.toml
[INFO] started frobbing 10XGenomics/bamtofastq
[INFO] finished frobbing 10XGenomics/bamtofastq
[INFO] frobbed toml for 10XGenomics/bamtofastq written to work/ex/beta-1.37-6/sources/beta-2019-07-23/gh/10XGenomics/bamtofastq/Cargo.toml
[INFO] crate 10XGenomics/bamtofastq already has a lockfile, it will not be regenerated
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+1.36.0" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] running `"/mnt/big/crater/work/local/cargo-home/bin/cargo" "+beta-2019-07-23" "fetch" "--locked" "--manifest-path" "Cargo.toml"`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] testing 10XGenomics/bamtofastq against 1.36.0 for beta-1.37-6
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-6/1.36.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/1.36.0/gh/10XGenomics/bamtofastq:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.36.0" "build" "--frozen"`
[INFO] [stdout] 9c0c9bffa8510a64f822153fab0e9c8c4eeabc99bbf1caeb164d626d78fd5d04
[INFO] running `"docker" "start" "-a" "9c0c9bffa8510a64f822153fab0e9c8c4eeabc99bbf1caeb164d626d78fd5d04"`
[INFO] [stderr]    Compiling cc v1.0.20
[INFO] [stderr]    Compiling regex v1.0.2
[INFO] [stderr]    Compiling termcolor v1.0.1
[INFO] [stderr]    Compiling bindgen v0.36.1
[INFO] [stderr]    Compiling serde v1.0.74
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling ieee754 v0.2.2
[INFO] [stderr]    Compiling min-max-heap v1.2.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling clang-sys v0.22.0
[INFO] [stderr]    Compiling memchr v1.0.2
[INFO] [stderr]    Compiling proc-macro2 v0.3.5
[INFO] [stderr]    Compiling which v1.0.5
[INFO] [stderr]    Compiling fs-utils v1.1.0
[INFO] [stderr]    Compiling lz4-sys v1.8.0
[INFO] [stderr]    Compiling pretty_assertions v0.5.1
[INFO] [stderr]    Compiling itertools v0.6.5
[INFO] [stderr]    Compiling pulldown-cmark v0.0.8
[INFO] [stderr]    Compiling nom v3.2.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling tempfile v3.0.3
[INFO] [stderr]    Compiling syn v0.14.9
[INFO] [stderr]    Compiling parking_lot v0.5.5
[INFO] [stderr]    Compiling ordered-float v0.3.0
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]    Compiling quote v0.5.2
[INFO] [stderr]    Compiling libloading v0.5.0
[INFO] [stderr]    Compiling backtrace-sys v0.1.24
[INFO] [stderr]    Compiling libz-sys v1.0.20
[INFO] [stderr]    Compiling miniz-sys v0.1.10
[INFO] [stderr]    Compiling crossbeam-channel v0.1.3
[INFO] [stderr]    Compiling skeptic v0.9.0
[INFO] [stderr]    Compiling cexpr v0.2.3
[INFO] [stderr]    Compiling lz4 v1.22.0
[INFO] [stderr]    Compiling backtrace v0.3.9
[INFO] [stderr]    Compiling flate2 v1.0.2
[INFO] [stderr]    Compiling synstructure v0.9.0
[INFO] [stderr]    Compiling serde_derive v1.0.74
[INFO] [stderr]    Compiling os_type v2.0.0
[INFO] [stderr]    Compiling env_logger v0.5.12
[INFO] [stderr]    Compiling toml v0.4.6
[INFO] [stderr]    Compiling bincode v1.0.1
[INFO] [stderr]    Compiling csv v1.0.1
[INFO] [stderr]    Compiling serde_bytes v0.10.4
[INFO] [stderr]    Compiling failure_derive v0.1.2
[INFO] [stderr]    Compiling failure v0.1.2
[INFO] [stderr]    Compiling bio-types v0.2.0
[INFO] [stderr]    Compiling shardio v0.3.0 (https://github.com/10XGenomics/rust-shardio.git#205727d5)
[INFO] [stderr]    Compiling human-panic v1.0.1
[INFO] [stderr]    Compiling docopt v1.0.0
[INFO] [stderr]    Compiling rust-htslib v0.21.0
[INFO] [stderr]    Compiling bamtofastq v1.2.1 (/opt/crater/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3m 17s
[INFO] running `"docker" "inspect" "9c0c9bffa8510a64f822153fab0e9c8c4eeabc99bbf1caeb164d626d78fd5d04"`
[INFO] running `"docker" "rm" "-f" "9c0c9bffa8510a64f822153fab0e9c8c4eeabc99bbf1caeb164d626d78fd5d04"`
[INFO] [stdout] 9c0c9bffa8510a64f822153fab0e9c8c4eeabc99bbf1caeb164d626d78fd5d04
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-6/1.36.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/1.36.0/gh/10XGenomics/bamtofastq:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.36.0" "test" "--frozen" "--no-run"`
[INFO] [stdout] 493312df8ee61fefa0df9b3f3309d4e6f6fb0d10a647d4edb0e87944551953a3
[INFO] running `"docker" "start" "-a" "493312df8ee61fefa0df9b3f3309d4e6f6fb0d10a647d4edb0e87944551953a3"`
[INFO] [stderr]    Compiling bamtofastq v1.2.1 (/opt/crater/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 11.45s
[INFO] running `"docker" "inspect" "493312df8ee61fefa0df9b3f3309d4e6f6fb0d10a647d4edb0e87944551953a3"`
[INFO] running `"docker" "rm" "-f" "493312df8ee61fefa0df9b3f3309d4e6f6fb0d10a647d4edb0e87944551953a3"`
[INFO] [stdout] 493312df8ee61fefa0df9b3f3309d4e6f6fb0d10a647d4edb0e87944551953a3
[INFO] running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.37-6/worker-6/1.36.0:/opt/crater/target:rw,Z" "-v" "/mnt/big/crater/work/ex/beta-1.37-6/sources/1.36.0/gh/10XGenomics/bamtofastq:/opt/crater/workdir:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/opt/crater/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/opt/crater/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/opt/crater/workdir" "-e" "MAP_USER_ID=1000" "-e" "CARGO_TARGET_DIR=/opt/crater/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/crater/cargo-home" "-e" "RUSTUP_HOME=/opt/crater/rustup-home" "-w" "/opt/crater/workdir" "-m" "1536M" "--network" "none" "rustops/crates-build-env" "/opt/crater/cargo-home/bin/cargo" "+1.36.0" "test" "--frozen"`
[INFO] [stdout] 202bedcf02e39872362c64de75586ce190a806713ab1187bc4685c8dfeb98e77
[INFO] running `"docker" "start" "-a" "202bedcf02e39872362c64de75586ce190a806713ab1187bc4685c8dfeb98e77"`
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 0.20s
[INFO] [stderr]      Running /opt/crater/target/debug/deps/bamtofastq-aefbd2c5635ece05
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test tests::test_cr12 ... ok
[INFO] [stdout] test tests::test_lr21 ... ok
[INFO] [stdout] test tests::test_lr20 ... ok
[INFO] [stdout] test tests::test_cr12_v1 ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `"docker" "inspect" "202bedcf02e39872362c64de75586ce190a806713ab1187bc4685c8dfeb98e77"`
[INFO] running `"docker" "rm" "-f" "202bedcf02e39872362c64de75586ce190a806713ab1187bc4685c8dfeb98e77"`
[INFO] [stdout] 202bedcf02e39872362c64de75586ce190a806713ab1187bc4685c8dfeb98e77