Dec 02 10:27:18.813 INFO testing yacrd-0.4.1 against 1.30.1 for beta-1.31-5
Dec 02 10:27:18.813 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-5/worker-2/1.30.1:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/beta-1.31-5/1.30.1:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +1.30.1 build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Dec 02 10:27:19.428 INFO [stdout] d61fb3ce666f941ec64ecd5194c32b15786158ecaa45df26e82791a7d03a0982
Dec 02 10:27:19.430 INFO running `"docker" "start" "-a" "d61fb3ce666f941ec64ecd5194c32b15786158ecaa45df26e82791a7d03a0982"`
Dec 02 10:27:20.767 INFO [stderr] usermod: no changes
Dec 02 10:27:21.031 INFO [stderr]    Compiling bv v0.7.4
Dec 02 10:27:21.036 INFO [stderr]    Compiling bytecount v0.3.2
Dec 02 10:27:21.043 INFO [stderr]    Compiling itertools v0.6.5
Dec 02 10:27:21.050 INFO [stderr]    Compiling itertools-num v0.1.3
Dec 02 10:27:21.052 INFO [stderr]    Compiling miniz-sys v0.1.11
Dec 02 10:27:21.052 INFO [stderr]    Compiling lzma-sys v0.1.11
Dec 02 10:27:21.055 INFO [stderr]    Compiling ordered-float v0.5.2
Dec 02 10:27:21.055 INFO [stderr]    Compiling regex v0.2.11
Dec 02 10:27:22.619 INFO [stderr]    Compiling serde v1.0.80
Dec 02 10:27:22.720 INFO [stderr]    Compiling flate2 v1.0.5
Dec 02 10:27:23.899 INFO [stderr]    Compiling xz2 v0.1.6
Dec 02 10:27:26.851 INFO [stderr]    Compiling ndarray v0.9.1
Dec 02 10:27:41.527 INFO [stderr]    Compiling multimap v0.4.0
Dec 02 10:27:41.539 INFO [stderr]    Compiling vec_map v0.8.1
Dec 02 10:27:41.559 INFO [stderr]    Compiling csv v1.0.2
Dec 02 10:27:41.567 INFO [stderr]    Compiling serde_json v1.0.33
Dec 02 10:27:48.583 INFO [stderr]    Compiling clap v2.32.0
Dec 02 10:27:52.147 INFO [stderr]    Compiling bio v0.21.0
Dec 02 10:28:08.354 INFO [stderr]    Compiling yacrd v0.4.1 (/source)
Dec 02 10:28:15.755 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 54.97s
Dec 02 10:28:15.760 INFO [stderr] su: No module specific data is present
Dec 02 10:28:16.140 INFO running `"docker" "inspect" "d61fb3ce666f941ec64ecd5194c32b15786158ecaa45df26e82791a7d03a0982"`
Dec 02 10:28:16.216 INFO running `"docker" "rm" "-f" "d61fb3ce666f941ec64ecd5194c32b15786158ecaa45df26e82791a7d03a0982"`
Dec 02 10:28:16.319 INFO [stdout] d61fb3ce666f941ec64ecd5194c32b15786158ecaa45df26e82791a7d03a0982
Dec 02 10:28:16.320 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-5/worker-2/1.30.1:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/beta-1.31-5/1.30.1:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +1.30.1 test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Dec 02 10:28:16.504 INFO [stdout] 5906591bd7ef5e6e2071fcfabd26ccf0f3e576dfc6c526c501edba2337bce238
Dec 02 10:28:16.508 INFO running `"docker" "start" "-a" "5906591bd7ef5e6e2071fcfabd26ccf0f3e576dfc6c526c501edba2337bce238"`
Dec 02 10:28:16.923 INFO [stderr] usermod: no changes
Dec 02 10:28:17.040 INFO [stderr]    Compiling yacrd v0.4.1 (/source)
Dec 02 10:28:25.107 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 8.16s
Dec 02 10:28:25.109 INFO [stderr] su: No module specific data is present
Dec 02 10:28:25.456 INFO running `"docker" "inspect" "5906591bd7ef5e6e2071fcfabd26ccf0f3e576dfc6c526c501edba2337bce238"`
Dec 02 10:28:25.793 INFO running `"docker" "rm" "-f" "5906591bd7ef5e6e2071fcfabd26ccf0f3e576dfc6c526c501edba2337bce238"`
Dec 02 10:28:26.003 INFO [stdout] 5906591bd7ef5e6e2071fcfabd26ccf0f3e576dfc6c526c501edba2337bce238
Dec 02 10:28:26.009 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-5/worker-2/1.30.1:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/beta-1.31-5/1.30.1:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +1.30.1 test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Dec 02 10:28:26.347 INFO [stdout] e69eb48d32d783a967c634cdc727d01a2770e7231986eb4c3f4e45743ff28d13
Dec 02 10:28:26.347 INFO running `"docker" "start" "-a" "e69eb48d32d783a967c634cdc727d01a2770e7231986eb4c3f4e45743ff28d13"`
Dec 02 10:28:27.471 INFO [stderr] usermod: no changes
Dec 02 10:28:27.595 INFO [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 0.09s
Dec 02 10:28:27.600 INFO [stderr]      Running /target/debug/deps/yacrd-f970049cc3f9b2cc
Dec 02 10:28:27.603 INFO [stdout] 
Dec 02 10:28:27.603 INFO [stdout] running 32 tests
Dec 02 10:28:27.606 INFO [stdout] test chimera::test::find_chimera_mhap_min_mers_float ... ok
Dec 02 10:28:27.606 INFO [stdout] test chimera::test::find_chimera ... ok
Dec 02 10:28:27.612 INFO [stdout] test chimera::test::formating_gap ... ok
Dec 02 10:28:27.612 INFO [stdout] test chimera::test::mapping2read2mapping ... ok
Dec 02 10:28:27.615 INFO [stdout] test chimera::test::find_chimera_json_output ... ok
Dec 02 10:28:27.615 INFO [stdout] test chimera::test::find_chimera_cov_1 ... ok
Dec 02 10:28:27.616 INFO [stdout] test file::test::compression_from_input_or_cli ... ok
Dec 02 10:28:27.616 INFO [stdout] test io::mhap::test::read ... ok
Dec 02 10:28:27.617 INFO [stdout] test file::test::compression_from_file ... ok
Dec 02 10:28:27.617 INFO [stdout] test chimera::test::find_not_covered ... ok
Dec 02 10:28:27.617 INFO [stdout] test chimera::test::notcovered_prior_to_chimera ... ok
Dec 02 10:28:27.617 INFO [stdout] test chimera::test::notcovered_overlap_extremity ... ok
Dec 02 10:28:27.618 INFO [stdout] test postdetection::fasta::test::filtred ... ok
Dec 02 10:28:27.618 INFO [stdout] test postdetection::fasta::test::fasta_shorter_than_position ... ok
Dec 02 10:28:27.619 INFO [stdout] test io::paf::test::read ... ok
Dec 02 10:28:27.620 INFO [stdout] test io::paf::test::write ... ok
Dec 02 10:28:27.620 INFO [stdout] test io::paf::test::read_sam_field ... ok
Dec 02 10:28:27.620 INFO [stdout] test postdetection::fasta::test::split ... ok
Dec 02 10:28:27.621 INFO [stdout] test postdetection::fastq::test::extracted ... ok
Dec 02 10:28:27.621 INFO [stdout] test io::paf::test::write_sam_field ... ok
Dec 02 10:28:27.621 INFO [stdout] test postdetection::fasta::test::extracted ... ok
Dec 02 10:28:27.621 INFO [stdout] test io::mhap::test::write ... ok
Dec 02 10:28:27.621 INFO [stdout] test postdetection::fastq::test::fastq ... ok
Dec 02 10:28:27.622 INFO [stdout] test postdetection::mhap::test::filtred ... ok
Dec 02 10:28:27.622 INFO [stdout] test postdetection::paf::test::filtred ... ok
Dec 02 10:28:27.623 INFO [stdout] test postdetection::paf::test::extracted ... ok
Dec 02 10:28:27.623 INFO [stdout] test postdetection::test::out_name ... ok
Dec 02 10:28:27.624 INFO [stdout] test utils::test::filename_based_compressed ... ok
Dec 02 10:28:27.624 INFO [stdout] test utils::test::filename_based ... ok
Dec 02 10:28:27.624 INFO [stdout] test utils::test::filename_mapping_only ... ok
Dec 02 10:28:27.624 INFO [stdout] test postdetection::fastq::test::filtred ... ok
Dec 02 10:28:27.625 INFO [stdout] test postdetection::mhap::test::extracted ... ok
Dec 02 10:28:27.625 INFO [stdout] 
Dec 02 10:28:27.625 INFO [stdout] test result: ok. 32 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
Dec 02 10:28:27.625 INFO [stdout] 
Dec 02 10:28:27.628 INFO [stderr] su: No module specific data is present
Dec 02 10:28:27.948 INFO running `"docker" "inspect" "e69eb48d32d783a967c634cdc727d01a2770e7231986eb4c3f4e45743ff28d13"`
Dec 02 10:28:28.032 INFO running `"docker" "rm" "-f" "e69eb48d32d783a967c634cdc727d01a2770e7231986eb4c3f4e45743ff28d13"`
Dec 02 10:28:28.147 INFO [stdout] e69eb48d32d783a967c634cdc727d01a2770e7231986eb4c3f4e45743ff28d13
