Dec 02 10:40:11.764 INFO testing xgboost-0.1.2 against 1.30.1 for beta-1.31-5 Dec 02 10:40:11.764 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-5/worker-3/1.30.1:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-3/beta-1.31-5/1.30.1:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +1.30.1 build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"` Dec 02 10:40:12.297 INFO [stdout] 1948b452ba9c4c1658ceb71cb7737591d258ac9638421d09cdaeaf3ca17e77e0 Dec 02 10:40:12.303 INFO running `"docker" "start" "-a" "1948b452ba9c4c1658ceb71cb7737591d258ac9638421d09cdaeaf3ca17e77e0"` Dec 02 10:40:13.663 INFO [stderr] usermod: no changes Dec 02 10:40:13.879 INFO [stderr] Compiling ucd-util v0.1.3 Dec 02 10:40:13.891 INFO [stderr] Compiling bindgen v0.36.1 Dec 02 10:40:13.891 INFO [stderr] Compiling peeking_take_while v0.1.2 Dec 02 10:40:13.899 INFO [stderr] Compiling clang-sys v0.22.0 Dec 02 10:40:13.899 INFO [stderr] Compiling thread_local v0.3.6 Dec 02 10:40:13.899 INFO [stderr] Compiling humantime v1.2.0 Dec 02 10:40:13.899 INFO [stderr] Compiling proc-macro2 v0.3.5 Dec 02 10:40:13.899 INFO [stderr] Compiling memchr v1.0.2 Dec 02 10:40:18.959 INFO [stderr] Compiling atty v0.2.11 Dec 02 10:40:18.963 INFO [stderr] Compiling which v1.0.5 Dec 02 10:40:18.975 INFO [stderr] Compiling memchr v2.1.1 Dec 02 10:40:18.995 INFO [stderr] Compiling libloading v0.5.0 Dec 02 10:40:23.222 INFO [stderr] Compiling nom v3.2.1 Dec 02 10:40:23.391 INFO [stderr] Compiling regex-syntax v0.6.4 Dec 02 10:40:23.391 INFO [stderr] Compiling regex-syntax v0.5.6 Dec 02 10:40:23.403 INFO [stderr] Compiling clap v2.32.0 Dec 02 10:40:23.531 INFO [stderr] Compiling quote v0.5.2 Dec 02 10:40:24.479 INFO [stderr] Compiling rand v0.6.1 Dec 02 10:40:27.868 INFO [stderr] Compiling aho-corasick v0.6.9 Dec 02 10:40:37.701 INFO [stderr] Compiling tempfile v3.0.5 Dec 02 10:40:41.007 INFO [stderr] Compiling cexpr v0.2.3 Dec 02 10:41:01.563 INFO [stderr] Compiling regex v0.2.11 Dec 02 10:41:04.844 INFO [stderr] Compiling regex v1.1.0 Dec 02 10:41:16.658 INFO [stderr] Compiling env_logger v0.5.13 Dec 02 10:41:34.719 INFO [stderr] Compiling xgboost-sys v0.1.1 Dec 02 10:45:20.842 INFO [stderr] error: failed to run custom build command for `xgboost-sys v0.1.1` Dec 02 10:45:20.842 INFO [stderr] process didn't exit successfully: `/target/debug/build/xgboost-sys-c4845ed9dc32a088/build-script-build` (exit code: 101) Dec 02 10:45:20.842 INFO [stderr] --- stdout Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/logging.o src/logging.cc >build/logging.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/logging.cc -o build/logging.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/learner.o src/learner.cc >build/learner.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/learner.cc -o build/learner.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/predictor.o src/predictor/predictor.cc >build/predictor/predictor.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/predictor.cc -o build/predictor/predictor.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/predictor/cpu_predictor.o src/predictor/cpu_predictor.cc >build/predictor/cpu_predictor.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/predictor/cpu_predictor.cc -o build/predictor/cpu_predictor.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/host_device_vector.o src/common/host_device_vector.cc >build/common/host_device_vector.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/host_device_vector.cc -o build/common/host_device_vector.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/common.o src/common/common.cc >build/common/common.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/common.cc -o build/common/common.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/common/hist_util.o src/common/hist_util.cc >build/common/hist_util.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/common/hist_util.cc -o build/common/hist_util.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/metric.o src/metric/metric.cc >build/metric/metric.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/metric.cc -o build/metric/metric.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/rank_metric.o src/metric/rank_metric.cc >build/metric/rank_metric.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/rank_metric.cc -o build/metric/rank_metric.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/elementwise_metric.o src/metric/elementwise_metric.cc >build/metric/elementwise_metric.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/elementwise_metric.cc -o build/metric/elementwise_metric.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/metric/multiclass_metric.o src/metric/multiclass_metric.cc >build/metric/multiclass_metric.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/metric/multiclass_metric.cc -o build/metric/multiclass_metric.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/hinge.o src/objective/hinge.cc >build/objective/hinge.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/hinge.cc -o build/objective/hinge.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/multiclass_obj.o src/objective/multiclass_obj.cc >build/objective/multiclass_obj.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/multiclass_obj.cc -o build/objective/multiclass_obj.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/objective.o src/objective/objective.cc >build/objective/objective.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/objective.cc -o build/objective/objective.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/rank_obj.o src/objective/rank_obj.cc >build/objective/rank_obj.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/rank_obj.cc -o build/objective/rank_obj.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/objective/regression_obj.o src/objective/regression_obj.cc >build/objective/regression_obj.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/objective/regression_obj.cc -o build/objective/regression_obj.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_dmatrix.o src/data/sparse_page_dmatrix.cc >build/data/sparse_page_dmatrix.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_dmatrix.cc -o build/data/sparse_page_dmatrix.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_source.o src/data/sparse_page_source.cc >build/data/sparse_page_source.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_source.cc -o build/data/sparse_page_source.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_writer.o src/data/sparse_page_writer.cc >build/data/sparse_page_writer.d Dec 02 10:45:20.842 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_writer.cc -o build/data/sparse_page_writer.o Dec 02 10:45:20.842 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_csr_source.o src/data/simple_csr_source.cc >build/data/simple_csr_source.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_csr_source.cc -o build/data/simple_csr_source.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/data.o src/data/data.cc >build/data/data.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/data.cc -o build/data/data.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/sparse_page_raw_format.o src/data/sparse_page_raw_format.cc >build/data/sparse_page_raw_format.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/sparse_page_raw_format.cc -o build/data/sparse_page_raw_format.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/data/simple_dmatrix.o src/data/simple_dmatrix.cc >build/data/simple_dmatrix.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/data/simple_dmatrix.cc -o build/data/simple_dmatrix.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_prune.o src/tree/updater_prune.cc >build/tree/updater_prune.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_prune.cc -o build/tree/updater_prune.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_updater.o src/tree/tree_updater.cc >build/tree/tree_updater.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_updater.cc -o build/tree/tree_updater.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_histmaker.o src/tree/updater_histmaker.cc >build/tree/updater_histmaker.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_histmaker.cc -o build/tree/updater_histmaker.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_refresh.o src/tree/updater_refresh.cc >build/tree/updater_refresh.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_refresh.cc -o build/tree/updater_refresh.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/tree_model.o src/tree/tree_model.cc >build/tree/tree_model.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/tree_model.cc -o build/tree/tree_model.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_sync.o src/tree/updater_sync.cc >build/tree/updater_sync.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_sync.cc -o build/tree/updater_sync.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/split_evaluator.o src/tree/split_evaluator.cc >build/tree/split_evaluator.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/split_evaluator.cc -o build/tree/split_evaluator.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_skmaker.o src/tree/updater_skmaker.cc >build/tree/updater_skmaker.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_skmaker.cc -o build/tree/updater_skmaker.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_colmaker.o src/tree/updater_colmaker.cc >build/tree/updater_colmaker.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_colmaker.cc -o build/tree/updater_colmaker.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/tree/updater_fast_hist.o src/tree/updater_fast_hist.cc >build/tree/updater_fast_hist.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/tree/updater_fast_hist.cc -o build/tree/updater_fast_hist.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbtree.o src/gbm/gbtree.cc >build/gbm/gbtree.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbtree.cc -o build/gbm/gbtree.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gblinear.o src/gbm/gblinear.cc >build/gbm/gblinear.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gblinear.cc -o build/gbm/gblinear.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/gbm/gbm.o src/gbm/gbm.cc >build/gbm/gbm.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/gbm/gbm.cc -o build/gbm/gbm.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api.o src/c_api/c_api.cc >build/c_api/c_api.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api.cc -o build/c_api/c_api.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/c_api/c_api_error.o src/c_api/c_api_error.cc >build/c_api/c_api_error.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/c_api/c_api_error.cc -o build/c_api/c_api_error.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/linear_updater.o src/linear/linear_updater.cc >build/linear/linear_updater.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/linear_updater.cc -o build/linear/linear_updater.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_shotgun.o src/linear/updater_shotgun.cc >build/linear/updater_shotgun.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_shotgun.cc -o build/linear/updater_shotgun.o Dec 02 10:45:20.843 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/linear/updater_coordinate.o src/linear/updater_coordinate.cc >build/linear/updater_coordinate.d Dec 02 10:45:20.843 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/linear/updater_coordinate.cc -o build/linear/updater_coordinate.o Dec 02 10:45:20.843 INFO [stderr] cd dmlc-core; "make" libdmlc.a config=/target/debug/build/xgboost-sys-2d32e1b6d7d1eee1/out/xgboost/make/config.mk; cd /target/debug/build/xgboost-sys-2d32e1b6d7d1eee1/out/xgboost Dec 02 10:45:20.843 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-2d32e1b6d7d1eee1/out/xgboost/dmlc-core' Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o line_split.o src/io/line_split.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o indexed_recordio_split.o src/io/indexed_recordio_split.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio_split.o src/io/recordio_split.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o input_split_base.o src/io/input_split_base.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o io.o src/io.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o filesys.o src/io/filesys.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o local_filesys.o src/io/local_filesys.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o data.o src/data.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o recordio.o src/recordio.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wno-unknown-pragmas -Iinclude -std=c++0x -fopenmp -fPIC -DDMLC_USE_HDFS=0 -DDMLC_USE_S3=0 -DDMLC_USE_AZURE=0 -msse2 -o config.o src/config.cc Dec 02 10:45:20.843 INFO [stderr] ar cr libdmlc.a line_split.o indexed_recordio_split.o recordio_split.o input_split_base.o io.o filesys.o local_filesys.o data.o recordio.o config.o Dec 02 10:45:20.843 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-2d32e1b6d7d1eee1/out/xgboost/dmlc-core' Dec 02 10:45:20.843 INFO [stderr] cd rabit; "make" lib/librabit.a USE_SSE=1; cd /target/debug/build/xgboost-sys-2d32e1b6d7d1eee1/out/xgboost Dec 02 10:45:20.843 INFO [stderr] make[1]: Entering directory '/target/debug/build/xgboost-sys-2d32e1b6d7d1eee1/out/xgboost/rabit' Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_base.o src/allreduce_base.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o allreduce_robust.o src/allreduce_robust.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o engine.o src/engine.cc Dec 02 10:45:20.843 INFO [stderr] g++ -c -O3 -Wall -Wextra -Wno-unused-parameter -Wno-unknown-pragmas -std=c++0x -msse2 -fPIC -o c_api.o src/c_api.cc Dec 02 10:45:20.843 INFO [stderr] ar cr lib/librabit.a allreduce_base.o allreduce_robust.o engine.o c_api.o Dec 02 10:45:20.843 INFO [stderr] make[1]: Leaving directory '/target/debug/build/xgboost-sys-2d32e1b6d7d1eee1/out/xgboost/rabit' Dec 02 10:45:20.843 INFO [stderr] ar crv lib/libxgboost.a build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o Dec 02 10:45:20.843 INFO [stderr] a - build/logging.o Dec 02 10:45:20.843 INFO [stderr] a - build/learner.o Dec 02 10:45:20.843 INFO [stderr] a - build/predictor/predictor.o Dec 02 10:45:20.843 INFO [stderr] a - build/predictor/cpu_predictor.o Dec 02 10:45:20.843 INFO [stderr] a - build/common/host_device_vector.o Dec 02 10:45:20.843 INFO [stderr] a - build/common/common.o Dec 02 10:45:20.843 INFO [stderr] a - build/common/hist_util.o Dec 02 10:45:20.843 INFO [stderr] a - build/metric/metric.o Dec 02 10:45:20.843 INFO [stderr] a - build/metric/rank_metric.o Dec 02 10:45:20.843 INFO [stderr] a - build/metric/elementwise_metric.o Dec 02 10:45:20.843 INFO [stderr] a - build/metric/multiclass_metric.o Dec 02 10:45:20.843 INFO [stderr] a - build/objective/hinge.o Dec 02 10:45:20.843 INFO [stderr] a - build/objective/multiclass_obj.o Dec 02 10:45:20.843 INFO [stderr] a - build/objective/objective.o Dec 02 10:45:20.843 INFO [stderr] a - build/objective/rank_obj.o Dec 02 10:45:20.843 INFO [stderr] a - build/objective/regression_obj.o Dec 02 10:45:20.843 INFO [stderr] a - build/data/sparse_page_dmatrix.o Dec 02 10:45:20.843 INFO [stderr] a - build/data/sparse_page_source.o Dec 02 10:45:20.843 INFO [stderr] a - build/data/sparse_page_writer.o Dec 02 10:45:20.843 INFO [stderr] a - build/data/simple_csr_source.o Dec 02 10:45:20.844 INFO [stderr] a - build/data/data.o Dec 02 10:45:20.844 INFO [stderr] a - build/data/sparse_page_raw_format.o Dec 02 10:45:20.844 INFO [stderr] a - build/data/simple_dmatrix.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/updater_prune.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/tree_updater.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/updater_histmaker.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/updater_refresh.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/tree_model.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/updater_sync.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/split_evaluator.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/updater_skmaker.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/updater_colmaker.o Dec 02 10:45:20.844 INFO [stderr] a - build/tree/updater_fast_hist.o Dec 02 10:45:20.844 INFO [stderr] a - build/gbm/gbtree.o Dec 02 10:45:20.844 INFO [stderr] a - build/gbm/gblinear.o Dec 02 10:45:20.844 INFO [stderr] a - build/gbm/gbm.o Dec 02 10:45:20.844 INFO [stderr] a - build/c_api/c_api.o Dec 02 10:45:20.844 INFO [stderr] a - build/c_api/c_api_error.o Dec 02 10:45:20.844 INFO [stderr] a - build/linear/linear_updater.o Dec 02 10:45:20.844 INFO [stderr] a - build/linear/updater_shotgun.o Dec 02 10:45:20.844 INFO [stderr] a - build/linear/updater_coordinate.o Dec 02 10:45:20.844 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -shared -o lib/libxgboost.so build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Dec 02 10:45:20.844 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -MM -MT build/cli_main.o src/cli_main.cc >build/cli_main.d Dec 02 10:45:20.844 INFO [stderr] g++ -c -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp src/cli_main.cc -o build/cli_main.o Dec 02 10:45:20.844 INFO [stderr] g++ -DDMLC_LOG_CUSTOMIZE=1 -std=c++11 -Wall -Wno-unknown-pragmas -Iinclude -Idmlc-core/include -Irabit/include -I/include -O3 -funroll-loops -msse2 -fPIC -fopenmp -o xgboost build/cli_main.o build/logging.o build/learner.o build/predictor/predictor.o build/predictor/cpu_predictor.o build/common/host_device_vector.o build/common/common.o build/common/hist_util.o build/metric/metric.o build/metric/rank_metric.o build/metric/elementwise_metric.o build/metric/multiclass_metric.o build/objective/hinge.o build/objective/multiclass_obj.o build/objective/objective.o build/objective/rank_obj.o build/objective/regression_obj.o build/data/sparse_page_dmatrix.o build/data/sparse_page_source.o build/data/sparse_page_writer.o build/data/simple_csr_source.o build/data/data.o build/data/sparse_page_raw_format.o build/data/simple_dmatrix.o build/tree/updater_prune.o build/tree/tree_updater.o build/tree/updater_histmaker.o build/tree/updater_refresh.o build/tree/tree_model.o build/tree/updater_sync.o build/tree/split_evaluator.o build/tree/updater_skmaker.o build/tree/updater_colmaker.o build/tree/updater_fast_hist.o build/gbm/gbtree.o build/gbm/gblinear.o build/gbm/gbm.o build/c_api/c_api.o build/c_api/c_api_error.o build/linear/linear_updater.o build/linear/updater_shotgun.o build/linear/updater_coordinate.o dmlc-core/libdmlc.a rabit/lib/librabit.a -pthread -lm -fopenmp -lrt -lrt Dec 02 10:45:20.844 INFO [stderr] Successfully build multi-thread xgboost Dec 02 10:45:20.844 INFO [stderr] Dec 02 10:45:20.844 INFO [stderr] --- stderr Dec 02 10:45:20.844 INFO [stderr] Makefile:31: MAKE [make] - checked OK Dec 02 10:45:20.844 INFO [stderr] src/c_api/c_api.cc: In function 'int XGDMatrixCreateFromDT(void**, const char**, xgboost::bst_ulong, xgboost::bst_ulong, void**, int)': Dec 02 10:45:20.844 INFO [stderr] src/c_api/c_api.cc:621:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] Dec 02 10:45:20.844 INFO [stderr] for (auto j = 0; j < ncol; ++j) { Dec 02 10:45:20.844 INFO [stderr] ^ Dec 02 10:45:20.844 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found Dec 02 10:45:20.844 INFO [stderr] /usr/include/stdio.h:33:11: fatal error: 'stddef.h' file not found, err: true Dec 02 10:45:20.844 INFO [stderr] thread 'main' panicked at 'Unable to generate bindings.: ()', libcore/result.rs:1009:5 Dec 02 10:45:20.844 INFO [stderr] stack backtrace: Dec 02 10:45:20.844 INFO [stderr] 0: 0x5595b2221dde - std::sys::unix::backtrace::tracing::imp::unwind_backtrace::h15749a98198ba25f Dec 02 10:45:20.844 INFO [stderr] at libstd/sys/unix/backtrace/tracing/gcc_s.rs:49 Dec 02 10:45:20.844 INFO [stderr] 1: 0x5595b2211316 - std::sys_common::backtrace::print::h0ba65c811294dbf0 Dec 02 10:45:20.844 INFO [stderr] at libstd/sys_common/backtrace.rs:71 Dec 02 10:45:20.844 INFO [stderr] at libstd/sys_common/backtrace.rs:59 Dec 02 10:45:20.844 INFO [stderr] 2: 0x5595b220f68d - std::panicking::default_hook::{{closure}}::h42bb31757f0fee64 Dec 02 10:45:20.844 INFO [stderr] at libstd/panicking.rs:211 Dec 02 10:45:20.844 INFO [stderr] 3: 0x5595b220f400 - std::panicking::default_hook::hebc8848d7aa7dbd9 Dec 02 10:45:20.844 INFO [stderr] at libstd/panicking.rs:227 Dec 02 10:45:20.844 INFO [stderr] 4: 0x5595b220fd3c - std::panicking::rust_panic_with_hook::h86e619a638415243 Dec 02 10:45:20.844 INFO [stderr] at libstd/panicking.rs:477 Dec 02 10:45:20.844 INFO [stderr] 5: 0x5595b220f8f9 - std::panicking::continue_panic_fmt::h2d2d2bfb065a70b2 Dec 02 10:45:20.844 INFO [stderr] at libstd/panicking.rs:391 Dec 02 10:45:20.844 INFO [stderr] 6: 0x5595b220f7f5 - rust_begin_unwind Dec 02 10:45:20.844 INFO [stderr] at libstd/panicking.rs:326 Dec 02 10:45:20.844 INFO [stderr] 7: 0x5595b2269b7b - core::panicking::panic_fmt::h2155aa66b67fe83c Dec 02 10:45:20.844 INFO [stderr] at libcore/panicking.rs:77 Dec 02 10:45:20.844 INFO [stderr] 8: 0x5595b1c39cc9 - core::result::unwrap_failed::ha605563fba0204c7 Dec 02 10:45:20.844 INFO [stderr] at libcore/macros.rs:26 Dec 02 10:45:20.844 INFO [stderr] 9: 0x5595b1c3992c - >::expect::h45262e227491f766 Dec 02 10:45:20.844 INFO [stderr] at libcore/result.rs:835 Dec 02 10:45:20.844 INFO [stderr] 10: 0x5595b1c3805c - build_script_build::main::h98b45f46a576f77a Dec 02 10:45:20.844 INFO [stderr] at /cargo-home/registry/src/github.com-1ecc6299db9ec823/xgboost-sys-0.1.1/build.rs:35 Dec 02 10:45:20.844 INFO [stderr] 11: 0x5595b1c3946f - std::rt::lang_start::{{closure}}::h6e6700defe72efe8 Dec 02 10:45:20.844 INFO [stderr] at libstd/rt.rs:74 Dec 02 10:45:20.844 INFO [stderr] 12: 0x5595b220f792 - std::panicking::try::do_call::h47665672c57b11e4 Dec 02 10:45:20.844 INFO [stderr] at libstd/rt.rs:59 Dec 02 10:45:20.844 INFO [stderr] at libstd/panicking.rs:310 Dec 02 10:45:20.844 INFO [stderr] 13: 0x5595b2234339 - __rust_maybe_catch_panic Dec 02 10:45:20.844 INFO [stderr] at libpanic_unwind/lib.rs:103 Dec 02 10:45:20.844 INFO [stderr] 14: 0x5595b221c4a5 - std::rt::lang_start_internal::had9505969b8e20a2 Dec 02 10:45:20.844 INFO [stderr] at libstd/panicking.rs:289 Dec 02 10:45:20.844 INFO [stderr] at libstd/panic.rs:392 Dec 02 10:45:20.844 INFO [stderr] at libstd/rt.rs:58 Dec 02 10:45:20.844 INFO [stderr] 15: 0x5595b1c39447 - std::rt::lang_start::hec3f7b938005add7 Dec 02 10:45:20.844 INFO [stderr] at libstd/rt.rs:74 Dec 02 10:45:20.844 INFO [stderr] 16: 0x5595b1c38c59 - main Dec 02 10:45:20.844 INFO [stderr] 17: 0x7f9f98da082f - __libc_start_main Dec 02 10:45:20.844 INFO [stderr] 18: 0x5595b1c37678 - _start Dec 02 10:45:20.844 INFO [stderr] 19: 0x0 - Dec 02 10:45:20.844 INFO [stderr] Dec 02 10:45:20.844 INFO [stderr] su: No module specific data is present Dec 02 10:45:21.462 INFO running `"docker" "inspect" "1948b452ba9c4c1658ceb71cb7737591d258ac9638421d09cdaeaf3ca17e77e0"` Dec 02 10:45:21.582 INFO running `"docker" "rm" "-f" "1948b452ba9c4c1658ceb71cb7737591d258ac9638421d09cdaeaf3ca17e77e0"` Dec 02 10:45:21.976 INFO [stdout] 1948b452ba9c4c1658ceb71cb7737591d258ac9638421d09cdaeaf3ca17e77e0