Nov 01 23:33:12.682 INFO testing yacrd-0.4.1 against beta-2018-10-30 for beta-1.31-1
Nov 01 23:33:12.683 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-1/worker-3/beta-2018-10-30:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-3/beta-1.31-1/beta-2018-10-30:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +beta-2018-10-30 build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 01 23:33:13.387 INFO blam! 1c2ef817d211e2af0870025ece42e8210f14a5eeab68c6e91013f3c8dc79c7cc
Nov 01 23:33:13.388 INFO running `"docker" "start" "-a" "1c2ef817d211e2af0870025ece42e8210f14a5eeab68c6e91013f3c8dc79c7cc"`
Nov 01 23:33:14.779 INFO kablam! usermod: no changes
Nov 01 23:33:15.007 INFO kablam!    Compiling matrixmultiply v0.1.15
Nov 01 23:33:15.027 INFO kablam!    Compiling serde v1.0.80
Nov 01 23:33:15.028 INFO kablam!    Compiling lzma-sys v0.1.11
Nov 01 23:33:15.028 INFO kablam!    Compiling num-complex v0.1.43
Nov 01 23:33:15.028 INFO kablam!    Compiling csv-core v0.1.4
Nov 01 23:33:20.352 INFO kablam!    Compiling ndarray v0.9.1
Nov 01 23:33:20.480 INFO kablam!    Compiling xz2 v0.1.6
Nov 01 23:33:34.851 INFO kablam!    Compiling multimap v0.4.0
Nov 01 23:33:34.852 INFO kablam!    Compiling csv v1.0.2
Nov 01 23:33:34.852 INFO kablam!    Compiling vec_map v0.8.1
Nov 01 23:33:34.854 INFO kablam!    Compiling bv v0.7.4
Nov 01 23:33:34.854 INFO kablam!    Compiling serde_json v1.0.32
Nov 01 23:33:38.013 INFO kablam!    Compiling clap v2.32.0
Nov 01 23:33:40.784 INFO kablam!    Compiling bio v0.21.0
Nov 01 23:33:58.907 INFO kablam!    Compiling yacrd v0.4.1 (/source)
Nov 01 23:34:07.223 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 52.41s
Nov 01 23:34:07.233 INFO kablam! su: No module specific data is present
Nov 01 23:34:07.986 INFO running `"docker" "rm" "-f" "1c2ef817d211e2af0870025ece42e8210f14a5eeab68c6e91013f3c8dc79c7cc"`
Nov 01 23:34:08.271 INFO blam! 1c2ef817d211e2af0870025ece42e8210f14a5eeab68c6e91013f3c8dc79c7cc
Nov 01 23:34:08.280 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-1/worker-3/beta-2018-10-30:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-3/beta-1.31-1/beta-2018-10-30:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +beta-2018-10-30 test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 01 23:34:08.651 INFO blam! fd67621633e7c6de5e44349644a068aa8f001473fc8b043812f6cefea3c09fc0
Nov 01 23:34:08.651 INFO running `"docker" "start" "-a" "fd67621633e7c6de5e44349644a068aa8f001473fc8b043812f6cefea3c09fc0"`
Nov 01 23:34:09.178 INFO kablam! usermod: no changes
Nov 01 23:34:09.299 INFO kablam!    Compiling yacrd v0.4.1 (/source)
Nov 01 23:34:17.362 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 8.16s
Nov 01 23:34:17.372 INFO kablam! su: No module specific data is present
Nov 01 23:34:17.804 INFO running `"docker" "rm" "-f" "fd67621633e7c6de5e44349644a068aa8f001473fc8b043812f6cefea3c09fc0"`
Nov 01 23:34:17.911 INFO blam! fd67621633e7c6de5e44349644a068aa8f001473fc8b043812f6cefea3c09fc0
Nov 01 23:34:17.912 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-1/worker-3/beta-2018-10-30:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-3/beta-1.31-1/beta-2018-10-30:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +beta-2018-10-30 test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 01 23:34:18.112 INFO blam! 8a22b8e1a8293ee9a9b79992c11b412dc2b601e3ae3dfc53c8bf1f9205d27039
Nov 01 23:34:18.114 INFO running `"docker" "start" "-a" "8a22b8e1a8293ee9a9b79992c11b412dc2b601e3ae3dfc53c8bf1f9205d27039"`
Nov 01 23:34:18.495 INFO kablam! usermod: no changes
Nov 01 23:34:18.623 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 0.10s
Nov 01 23:34:18.628 INFO kablam!      Running /target/debug/deps/yacrd-a2171162d8853cdf
Nov 01 23:34:18.629 INFO blam! 
Nov 01 23:34:18.629 INFO blam! running 32 tests
Nov 01 23:34:18.631 INFO blam! test chimera::test::find_chimera_cov_1 ... ok
Nov 01 23:34:18.631 INFO blam! test chimera::test::find_chimera ... ok
Nov 01 23:34:18.633 INFO blam! test chimera::test::notcovered_prior_to_chimera ... ok
Nov 01 23:34:18.633 INFO blam! test chimera::test::mapping2read2mapping ... ok
Nov 01 23:34:18.634 INFO blam! test file::test::compression_from_file ... ok
Nov 01 23:34:18.635 INFO blam! test chimera::test::formating_gap ... ok
Nov 01 23:34:18.635 INFO blam! test chimera::test::find_not_covered ... ok
Nov 01 23:34:18.637 INFO blam! test chimera::test::find_chimera_mhap_min_mers_float ... ok
Nov 01 23:34:18.638 INFO blam! test file::test::compression_from_input_or_cli ... ok
Nov 01 23:34:18.638 INFO blam! test io::mhap::test::write ... ok
Nov 01 23:34:18.640 INFO blam! test chimera::test::notcovered_overlap_extremity ... ok
Nov 01 23:34:18.650 INFO blam! test io::paf::test::read ... ok
Nov 01 23:34:18.650 INFO blam! test io::mhap::test::read ... ok
Nov 01 23:34:18.650 INFO blam! test chimera::test::find_chimera_json_output ... ok
Nov 01 23:34:18.650 INFO blam! test io::paf::test::read_sam_field ... ok
Nov 01 23:34:18.651 INFO blam! test io::paf::test::write_sam_field ... ok
Nov 01 23:34:18.651 INFO blam! test postdetection::fasta::test::fasta_shorter_than_position ... ok
Nov 01 23:34:18.653 INFO kablam! su: No module specific data is present
Nov 01 23:34:18.653 INFO blam! test postdetection::fasta::test::extracted ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::fastq::test::filtred ... ok
Nov 01 23:34:18.653 INFO blam! test io::paf::test::write ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::fasta::test::split ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::mhap::test::filtred ... ok
Nov 01 23:34:18.653 INFO blam! test utils::test::filename_based ... ok
Nov 01 23:34:18.653 INFO blam! test utils::test::filename_based_compressed ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::fastq::test::extracted ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::test::out_name ... ok
Nov 01 23:34:18.653 INFO blam! test utils::test::filename_mapping_only ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::fastq::test::fastq ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::fasta::test::filtred ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::paf::test::extracted ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::paf::test::filtred ... ok
Nov 01 23:34:18.653 INFO blam! test postdetection::mhap::test::extracted ... ok
Nov 01 23:34:18.653 INFO blam! 
Nov 01 23:34:18.653 INFO blam! test result: ok. 32 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
Nov 01 23:34:18.653 INFO blam! 
Nov 01 23:34:18.916 INFO running `"docker" "rm" "-f" "8a22b8e1a8293ee9a9b79992c11b412dc2b601e3ae3dfc53c8bf1f9205d27039"`
Nov 01 23:34:19.011 INFO blam! 8a22b8e1a8293ee9a9b79992c11b412dc2b601e3ae3dfc53c8bf1f9205d27039
