Nov 01 17:16:18.474 INFO testing TuBieJun/stat_mut_sampleratio against beta-2018-10-30 for beta-1.31-1
Nov 01 17:16:18.474 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-1/worker-2/beta-2018-10-30:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/beta-1.31-1/beta-2018-10-30:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +beta-2018-10-30 build --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 01 17:16:19.131 INFO blam! 501e2269b5428d2e8da8514e65f861eac37b50a58af68af4fd2c5d7110b57435
Nov 01 17:16:19.145 INFO running `"docker" "start" "-a" "501e2269b5428d2e8da8514e65f861eac37b50a58af68af4fd2c5d7110b57435"`
Nov 01 17:16:20.953 INFO kablam! usermod: no changes
Nov 01 17:16:21.031 INFO kablam!    Compiling stat_germline_pos v0.1.0 (/source)
Nov 01 17:16:21.967 INFO kablam! warning: unused import: `SubCommand`
Nov 01 17:16:21.967 INFO kablam!  --> src/main.rs:9:22
Nov 01 17:16:21.967 INFO kablam!   |
Nov 01 17:16:21.967 INFO kablam! 9 | use clap::{Arg, App, SubCommand};
Nov 01 17:16:21.967 INFO kablam!   |                      ^^^^^^^^^^
Nov 01 17:16:21.967 INFO kablam!   |
Nov 01 17:16:21.967 INFO kablam!   = note: #[warn(unused_imports)] on by default
Nov 01 17:16:21.967 INFO kablam! 
Nov 01 17:16:22.119 INFO kablam! warning: variable does not need to be mutable
Nov 01 17:16:22.119 INFO kablam!   --> src/main.rs:18:9
Nov 01 17:16:22.119 INFO kablam!    |
Nov 01 17:16:22.119 INFO kablam! 18 |     let mut f = File::open(vcf_l)
Nov 01 17:16:22.119 INFO kablam!    |         ----^
Nov 01 17:16:22.119 INFO kablam!    |         |
Nov 01 17:16:22.119 INFO kablam!    |         help: remove this `mut`
Nov 01 17:16:22.119 INFO kablam!    |
Nov 01 17:16:22.119 INFO kablam!    = note: #[warn(unused_mut)] on by default
Nov 01 17:16:22.119 INFO kablam! 
Nov 01 17:16:22.138 INFO kablam! warning: variable `D_germline` should have a snake case name such as `d_germline`
Nov 01 17:16:22.138 INFO kablam!   --> src/main.rs:13:13
Nov 01 17:16:22.138 INFO kablam!    |
Nov 01 17:16:22.138 INFO kablam! 13 |             D_germline:&mut HashMap<String, HashMap<String, u32>>) -> u32 {
Nov 01 17:16:22.138 INFO kablam!    |             ^^^^^^^^^^
Nov 01 17:16:22.138 INFO kablam!    |
Nov 01 17:16:22.138 INFO kablam!    = note: #[warn(non_snake_case)] on by default
Nov 01 17:16:22.138 INFO kablam! 
Nov 01 17:16:22.140 INFO kablam! warning: variable `D_germline` should have a snake case name such as `d_germline`
Nov 01 17:16:22.140 INFO kablam!   --> src/main.rs:96:53
Nov 01 17:16:22.140 INFO kablam!    |
Nov 01 17:16:22.140 INFO kablam! 96 | fn out_info(out_file:&str, panel_list:&Vec<String>, D_germline:&HashMap<String, HashMap<String, u32>>, sample_num_list:&Vec<u32>) {
Nov 01 17:16:22.140 INFO kablam!    |                                                     ^^^^^^^^^^
Nov 01 17:16:22.140 INFO kablam! 
Nov 01 17:16:22.151 INFO kablam! warning: unused `std::result::Result` that must be used
Nov 01 17:16:22.151 INFO kablam!    --> src/main.rs:100:5
Nov 01 17:16:22.151 INFO kablam!     |
Nov 01 17:16:22.151 INFO kablam! 100 |     writer.write(header.as_bytes());
Nov 01 17:16:22.151 INFO kablam!     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 01 17:16:22.151 INFO kablam!     |
Nov 01 17:16:22.151 INFO kablam!     = note: #[warn(unused_must_use)] on by default
Nov 01 17:16:22.151 INFO kablam!     = note: this `Result` may be an `Err` variant, which should be handled
Nov 01 17:16:22.151 INFO kablam! 
Nov 01 17:16:22.151 INFO kablam! warning: unused `std::result::Result` that must be used
Nov 01 17:16:22.151 INFO kablam!    --> src/main.rs:112:9
Nov 01 17:16:22.151 INFO kablam!     |
Nov 01 17:16:22.151 INFO kablam! 112 |         writer.write(info.as_bytes());
Nov 01 17:16:22.151 INFO kablam!     |         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 01 17:16:22.151 INFO kablam!     |
Nov 01 17:16:22.151 INFO kablam!     = note: this `Result` may be an `Err` variant, which should be handled
Nov 01 17:16:22.151 INFO kablam! 
Nov 01 17:16:22.151 INFO kablam! warning: variable `D_germline` should have a snake case name such as `d_germline`
Nov 01 17:16:22.151 INFO kablam!    --> src/main.rs:155:9
Nov 01 17:16:22.151 INFO kablam!     |
Nov 01 17:16:22.151 INFO kablam! 155 |     let mut D_germline:HashMap<String, HashMap<String, u32>> = HashMap::new();
Nov 01 17:16:22.151 INFO kablam!     |         ^^^^^^^^^^^^^^
Nov 01 17:16:22.151 INFO kablam! 
Nov 01 17:16:24.195 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 3.22s
Nov 01 17:16:24.199 INFO kablam! su: No module specific data is present
Nov 01 17:16:25.327 INFO running `"docker" "rm" "-f" "501e2269b5428d2e8da8514e65f861eac37b50a58af68af4fd2c5d7110b57435"`
Nov 01 17:16:25.611 INFO blam! 501e2269b5428d2e8da8514e65f861eac37b50a58af68af4fd2c5d7110b57435
Nov 01 17:16:25.619 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-1/worker-2/beta-2018-10-30:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/beta-1.31-1/beta-2018-10-30:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +beta-2018-10-30 test --frozen --no-run" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 01 17:16:26.087 INFO blam! f8c1e74dee2c57da13e552bc4fc6933b94bdd2ff8a9da961043e46376e2f06bc
Nov 01 17:16:26.089 INFO running `"docker" "start" "-a" "f8c1e74dee2c57da13e552bc4fc6933b94bdd2ff8a9da961043e46376e2f06bc"`
Nov 01 17:16:27.662 INFO kablam! usermod: no changes
Nov 01 17:16:27.763 INFO kablam!    Compiling stat_germline_pos v0.1.0 (/source)
Nov 01 17:16:28.698 INFO kablam! warning: unused import: `SubCommand`
Nov 01 17:16:28.698 INFO kablam!  --> src/main.rs:9:22
Nov 01 17:16:28.698 INFO kablam!   |
Nov 01 17:16:28.698 INFO kablam! 9 | use clap::{Arg, App, SubCommand};
Nov 01 17:16:28.698 INFO kablam!   |                      ^^^^^^^^^^
Nov 01 17:16:28.698 INFO kablam!   |
Nov 01 17:16:28.698 INFO kablam!   = note: #[warn(unused_imports)] on by default
Nov 01 17:16:28.698 INFO kablam! 
Nov 01 17:16:28.807 INFO kablam! warning: variable does not need to be mutable
Nov 01 17:16:28.807 INFO kablam!   --> src/main.rs:18:9
Nov 01 17:16:28.807 INFO kablam!    |
Nov 01 17:16:28.807 INFO kablam! 18 |     let mut f = File::open(vcf_l)
Nov 01 17:16:28.807 INFO kablam!    |         ----^
Nov 01 17:16:28.807 INFO kablam!    |         |
Nov 01 17:16:28.807 INFO kablam!    |         help: remove this `mut`
Nov 01 17:16:28.807 INFO kablam!    |
Nov 01 17:16:28.815 INFO kablam!    = note: #[warn(unused_mut)] on by default
Nov 01 17:16:28.815 INFO kablam! 
Nov 01 17:16:28.823 INFO kablam! warning: variable `D_germline` should have a snake case name such as `d_germline`
Nov 01 17:16:28.823 INFO kablam!   --> src/main.rs:13:13
Nov 01 17:16:28.823 INFO kablam!    |
Nov 01 17:16:28.823 INFO kablam! 13 |             D_germline:&mut HashMap<String, HashMap<String, u32>>) -> u32 {
Nov 01 17:16:28.823 INFO kablam!    |             ^^^^^^^^^^
Nov 01 17:16:28.823 INFO kablam!    |
Nov 01 17:16:28.823 INFO kablam!    = note: #[warn(non_snake_case)] on by default
Nov 01 17:16:28.823 INFO kablam! 
Nov 01 17:16:28.823 INFO kablam! warning: variable `D_germline` should have a snake case name such as `d_germline`
Nov 01 17:16:28.823 INFO kablam!   --> src/main.rs:96:53
Nov 01 17:16:28.823 INFO kablam!    |
Nov 01 17:16:28.823 INFO kablam! 96 | fn out_info(out_file:&str, panel_list:&Vec<String>, D_germline:&HashMap<String, HashMap<String, u32>>, sample_num_list:&Vec<u32>) {
Nov 01 17:16:28.823 INFO kablam!    |                                                     ^^^^^^^^^^
Nov 01 17:16:28.823 INFO kablam! 
Nov 01 17:16:28.839 INFO kablam! warning: unused `std::result::Result` that must be used
Nov 01 17:16:28.839 INFO kablam!    --> src/main.rs:100:5
Nov 01 17:16:28.839 INFO kablam!     |
Nov 01 17:16:28.839 INFO kablam! 100 |     writer.write(header.as_bytes());
Nov 01 17:16:28.839 INFO kablam!     |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 01 17:16:28.839 INFO kablam!     |
Nov 01 17:16:28.839 INFO kablam!     = note: #[warn(unused_must_use)] on by default
Nov 01 17:16:28.839 INFO kablam!     = note: this `Result` may be an `Err` variant, which should be handled
Nov 01 17:16:28.839 INFO kablam! 
Nov 01 17:16:28.839 INFO kablam! warning: unused `std::result::Result` that must be used
Nov 01 17:16:28.839 INFO kablam!    --> src/main.rs:112:9
Nov 01 17:16:28.839 INFO kablam!     |
Nov 01 17:16:28.839 INFO kablam! 112 |         writer.write(info.as_bytes());
Nov 01 17:16:28.839 INFO kablam!     |         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
Nov 01 17:16:28.839 INFO kablam!     |
Nov 01 17:16:28.839 INFO kablam!     = note: this `Result` may be an `Err` variant, which should be handled
Nov 01 17:16:28.839 INFO kablam! 
Nov 01 17:16:28.839 INFO kablam! warning: variable `D_germline` should have a snake case name such as `d_germline`
Nov 01 17:16:28.839 INFO kablam!    --> src/main.rs:155:9
Nov 01 17:16:28.839 INFO kablam!     |
Nov 01 17:16:28.839 INFO kablam! 155 |     let mut D_germline:HashMap<String, HashMap<String, u32>> = HashMap::new();
Nov 01 17:16:28.839 INFO kablam!     |         ^^^^^^^^^^^^^^
Nov 01 17:16:28.839 INFO kablam! 
Nov 01 17:16:29.371 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 1.69s
Nov 01 17:16:29.379 INFO kablam! su: No module specific data is present
Nov 01 17:16:30.303 INFO running `"docker" "rm" "-f" "f8c1e74dee2c57da13e552bc4fc6933b94bdd2ff8a9da961043e46376e2f06bc"`
Nov 01 17:16:30.563 INFO blam! f8c1e74dee2c57da13e552bc4fc6933b94bdd2ff8a9da961043e46376e2f06bc
Nov 01 17:16:30.570 INFO running `"docker" "create" "-v" "/mnt/big/crater/work/local/target-dirs/beta-1.31-1/worker-2/beta-2018-10-30:/target:rw,Z" "-v" "/mnt/big/crater/work/local/test-source/worker-2/beta-1.31-1/beta-2018-10-30:/source:ro,Z" "-v" "/mnt/big/crater/work/local/cargo-home:/cargo-home:ro,Z" "-v" "/mnt/big/crater/work/local/rustup-home:/rustup-home:ro,Z" "-e" "USER_ID=1000" "-e" "SOURCE_DIR=/source" "-e" "USER_ID=1000" "-e" "CMD=cargo +beta-2018-10-30 test --frozen" "-e" "CARGO_TARGET_DIR=/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/cargo-home" "-e" "RUSTUP_HOME=/rustup-home" "-m" "1536M" "--network" "none" "crater"`
Nov 01 17:16:31.017 INFO blam! 35ceedbc3f17164cc5775d5fe8b16f0262d7148cc7d6b4d7652ffd3e9871239a
Nov 01 17:16:31.019 INFO running `"docker" "start" "-a" "35ceedbc3f17164cc5775d5fe8b16f0262d7148cc7d6b4d7652ffd3e9871239a"`
Nov 01 17:16:33.089 INFO kablam! usermod: no changes
Nov 01 17:16:33.172 INFO kablam!     Finished dev [unoptimized + debuginfo] target(s) in 0.05s
Nov 01 17:16:33.187 INFO kablam!      Running /target/debug/deps/stat_germline_pos-1ddcb7529bfbf580
Nov 01 17:16:33.187 INFO blam! 
Nov 01 17:16:33.187 INFO blam! running 0 tests
Nov 01 17:16:33.187 INFO blam! 
Nov 01 17:16:33.187 INFO blam! test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
Nov 01 17:16:33.187 INFO blam! 
Nov 01 17:16:33.191 INFO kablam! su: No module specific data is present
Nov 01 17:16:34.141 INFO running `"docker" "rm" "-f" "35ceedbc3f17164cc5775d5fe8b16f0262d7148cc7d6b4d7652ffd3e9871239a"`
Nov 01 17:16:34.443 INFO blam! 35ceedbc3f17164cc5775d5fe8b16f0262d7148cc7d6b4d7652ffd3e9871239a
