[INFO] fetching crate tinyhgvs 0.7.0...
[INFO] testing tinyhgvs-0.7.0 against 1.100.0-beta.1 for beta-1.100-2
[INFO] extracting crate tinyhgvs 0.7.0 into /workspace/builds/worker-1-tc2/source
[INFO] started tweaking crates.io crate tinyhgvs 0.7.0
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate tinyhgvs 0.7.0
[INFO] tweaked toml for crates.io crate tinyhgvs 0.7.0 written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate tinyhgvs 0.7.0 on toolchain 1.100.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate tinyhgvs 0.7.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:19:12
[INFO] [stderr]    |
[INFO] [stderr] 19 | homepage = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 24 | repository = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |              ---------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `tinyhgvs` (manifest) generated 1 warning
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8
[INFO] running `Command { std: "docker" "start" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:19:12
[INFO] [stderr]    |
[INFO] [stderr] 19 | homepage = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 24 | repository = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |              ---------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `tinyhgvs` (manifest) generated 1 warning
[INFO] [stderr]    Compiling memchr v2.7.4
[INFO] [stderr]    Compiling nom v8.0.0
[INFO] [stderr]    Compiling tinyhgvs v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 4.64s
[INFO] running `Command { std: "docker" "inspect" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:19:12
[INFO] [stderr]    |
[INFO] [stderr] 19 | homepage = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 24 | repository = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |              ---------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `tinyhgvs` (manifest) generated 1 warning
[INFO] [stderr]    Compiling tinyhgvs v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 2.39s
[INFO] running `Command { std: "docker" "inspect" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:19:12
[INFO] [stderr]    |
[INFO] [stderr] 19 | homepage = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 24 | repository = "https://github.com/svm-zhang/tinyhgvs"
[INFO] [stderr]    |              ---------------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `tinyhgvs` (manifest) generated 1 warning
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.02s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/build/tinyhgvs/cd5fe12f2ab720c7/out/tinyhgvs-cd5fe12f2ab720c7)
[INFO] [stdout] 
[INFO] [stdout] running 21 tests
[INFO] [stdout] test parser::nucleotide::tests::rejects_bracketed_genomic_uncertain_phase_forms ... ok
[INFO] [stdout] test parser::cdna::tests::parses_cdna_uncertain_allele_state ... ok
[INFO] [stdout] test parser::location::tests::parses_nucleotide_position_branches ... ok
[INFO] [stdout] test parser::nucleotide::tests::parses_genomic_uncertain_allele_state ... ok
[INFO] [stdout] test parser::protein::tests::parses_predicted_unknown_protein_insertion ... ok
[INFO] [stdout] test parser::protein::tests::parses_multiple_protein_substitution_alternatives ... ok
[INFO] [stdout] test parser::protein::tests::parses_alternative_protein_edits ... ok
[INFO] [stdout] test parser::rna::tests::parses_rna_uncertain_allele_state ... ok
[INFO] [stdout] test parser::nucleotide::tests::parses_nucleotide_edit_branches ... ok
[INFO] [stdout] test parser::protein::tests::rejects_frameshift_with_terminating_residue_change ... ok
[INFO] [stdout] test parser::protein::tests::parses_unknown_protein_insertion_sequence ... ok
[INFO] [stdout] test parser::protein::tests::parses_frameshift_with_alternative_residues ... ok
[INFO] [stdout] test parser::protein::tests::parses_bare_unknown_protein_insertion_sequence ... ok
[INFO] [stdout] test parser::rna::tests::rejects_single_form_as_rna_derived_allele_form ... ok
[INFO] [stdout] test parser::protein::tests::distinguishes_residue_and_edit_alternatives ... ok
[INFO] [stdout] test parser::protein::tests::parses_terminating_protein_insertion_sequence ... ok
[INFO] [stdout] test parser::rna::tests::parses_rna_derived_allele_form ... ok
[INFO] [stdout] test parser::protein::tests::parses_protein_substitution_with_alternative_residues ... ok
[INFO] [stdout] test parser::nucleotide::tests::parses_nucleotide_sequence_items ... ok
[INFO] [stdout] test parser::rna::tests::parses_predicted_rna_outcome ... ok
[INFO] [stdout] test parser::protein::tests::parses_multiple_alternative_protein_edits ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 21 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_diagnostics.rs (/opt/rustwide/target/debug/build/tinyhgvs/026bb19a3d9ebcb4/out/test_diagnostics-026bb19a3d9ebcb4)
[INFO] [stdout] 
[INFO] [stdout] running 5 tests
[INFO] [stdout] test displays_machine_code_message_and_version ... ok
[INFO] [stdout] test falls_back_to_invalid_syntax_for_unclassified_failures ... ok
[INFO] [stdout] test classifies_supported_diagnostic_codes ... ok
[INFO] [stdout] test malformed_uncertain_range_now_falls_back_to_generic_invalid_syntax ... ok
[INFO] [stderr]      Running tests/test_parser.rs (/opt/rustwide/target/debug/build/tinyhgvs/012ad2fd96e256ae/out/test_parser-012ad2fd96e256ae)
[INFO] [stdout] test formerly_unsupported_outcomes_and_alleles_now_parse ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 28 tests
[INFO] [stdout] test parses_coordinate_specific_alleles ... ok
[INFO] [stdout] test parses_nucleotide_edit_families ... ok
[INFO] [stdout] test parses_nucleotide_uncertain_locations ... ok
[INFO] [stdout] test parses_protein_edit_families ... ok
[INFO] [stdout] test parses_reference_context ... ok
[INFO] [stdout] test parses_protein_alternative_allele_form ... ok
[INFO] [stdout] test parses_rna_predicted_variant_outcome ... ok
[INFO] [stdout] test parses_protein_uncertain_consequence_forms ... ok
[INFO] [stdout] test parses_protein_no_change_outcomes ... ok
[INFO] [stdout] test parses_nucleotide_substitutions ... ok
[INFO] [stdout] test parses_remote_copied_sequence_in_genomic_insertion ... ok
[INFO] [stdout] test parses_rna_special_outcomes ... ok
[INFO] [stdout] test rejects_fully_unknown_repeat_quantity_range ... ok
[INFO] [stdout] test parses_cdna_utr_anchored_coordinates ... ok
[INFO] [stdout] test parses_repeat_quantity_edges ... ok
[INFO] [stdout] test parses_protein_alleles ... ok
[INFO] [stdout] test parses_protein_insertion_content ... ok
[INFO] [stdout] test parses_protein_special_outcomes ... ok
[INFO] [stdout] test parses_protein_substitution_and_prediction ... ok
[INFO] [stdout] test parses_protein_frameshift_extension_and_uncertain_location ... ok
[INFO] [stdout] test parses_rna_and_protein_derived_allele_forms ... ok
[INFO] [stdout] test parses_repeat_variants ... ok
[INFO] [stdout] test rejects_malformed_location_shapes ... ok
[INFO] [stdout] test parses_uncertain_allele_state ... ok
[INFO] [stdout] test rejects_malformed_comma_and_alternative_allele_forms ... ok
[INFO] [stdout] test parses_repeat_sequence_items ... ok
[INFO] [stdout] test rejects_unsupported_mixed_protein_allele_forms ... ok
[INFO] [stderr]    Doc-tests tinyhgvs
[INFO] [stdout] test rejects_malformed_protein_no_change_forms ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 28 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 28 tests
[INFO] [stdout] test src/model/core.rs - model::core::HgvsVariant (line 14) ... ok
[INFO] [stdout] test src/error.rs - error::ParseHgvsError (line 47) ... ok
[INFO] [stdout] test src/model/location.rs - model::location::Location (line 40) ... ok
[INFO] [stdout] test src/lib.rs - (line 30) ... ok
[INFO] [stdout] test src/model/core.rs - model::core::ReferenceSpec (line 58) ... ok
[INFO] [stdout] test src/model/allele.rs - model::allele::AllelePhase (line 15) ... ok
[INFO] [stdout] test src/model/core.rs - model::core::Accession (line 79) ... ok
[INFO] [stdout] test src/lib.rs - (line 58) ... ok
[INFO] [stdout] test src/model/core.rs - model::core::ProteinOutcome (line 224) ... ok
[INFO] [stdout] test src/model/allele.rs - model::allele::AlleleVariant (line 166) ... ok
[INFO] [stdout] test src/model/allele.rs - model::allele::Allele (line 100) ... ok
[INFO] [stdout] test src/model/nucleotide.rs - model::nucleotide::NucleotideCoordinate (line 131) ... ok
[INFO] [stdout] test src/model/core.rs - model::core::RnaOutcome (line 174) ... ok
[INFO] [stdout] test src/error.rs - error::ParseHgvsError (line 37) ... ok
[INFO] [stdout] test src/lib.rs - (line 108) ... ok
[INFO] [stdout] test src/model/nucleotide.rs - model::nucleotide::CopiedSequenceItem (line 63) ... ok
[INFO] [stdout] test src/model/location.rs - model::location::Location (line 60) ... ok
[INFO] [stdout] test src/error.rs - error::ParseHgvsErrorKind (line 69) ... ok
[INFO] [stdout] test src/model/protein.rs - model::protein::ProteinInsertionSequence (line 78) ... ok
[INFO] [stdout] test src/model/protein.rs - model::protein::ProteinExtensionEdit (line 180) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 74) ... ok
[INFO] [stdout] test src/model/protein.rs - model::protein::ProteinEdit (line 9) ... ok
[INFO] [stdout] test src/model/protein.rs - model::protein::ProteinFrameshiftStop (line 217) ... ok
[INFO] [stdout] test src/model/protein.rs - model::protein::ProteinExtensionTerminal (line 142) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 48) ... ok
[INFO] [stdout] test src/model/repeat.rs - model::repeat::RepeatEdit (line 32) ... ok
[INFO] [stdout] test src/parser.rs - parser::parse_hgvs (line 93) ... ok
[INFO] [stdout] test src/lib.rs - (line 75) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 28 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stdout] all doctests ran in 0.61s; merged doctests compilation took 0.58s
[INFO] running `Command { std: "docker" "inspect" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8", kill_on_drop: false }`
[INFO] [stdout] ca41a8b6b8b63d0103c5ea449c3e185a66263ba583ee88ef0c61c15091ba6cc8
