[INFO] fetching crate sanity-sc-rs 0.3.0...
[INFO] testing sanity-sc-rs-0.3.0 against 1.100.0-beta.1 for beta-1.100-2
[INFO] extracting crate sanity-sc-rs 0.3.0 into /workspace/builds/worker-4-tc2/source
[INFO] started tweaking crates.io crate sanity-sc-rs 0.3.0
[INFO] removed 0 missing examples
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate sanity-sc-rs 0.3.0
[INFO] tweaked toml for crates.io crate sanity-sc-rs 0.3.0 written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate sanity-sc-rs 0.3.0 on toolchain 1.100.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate sanity-sc-rs 0.3.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513
[INFO] running `Command { std: "docker" "start" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]    Compiling zerocopy v0.8.57
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling syn v3.0.5
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling rand_core v0.9.5
[INFO] [stderr]    Compiling thiserror-impl v2.0.20
[INFO] [stderr]    Compiling thiserror v2.0.20
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling rand_chacha v0.9.0
[INFO] [stderr]    Compiling rand v0.9.5
[INFO] [stderr]    Compiling rand_distr v0.5.1
[INFO] [stderr]    Compiling sanity-sc-rs v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 13.53s
[INFO] running `Command { std: "docker" "inspect" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.189
[INFO] [stderr]    Compiling crossbeam-utils v0.8.23
[INFO] [stderr]    Compiling cfg-if v1.0.4
[INFO] [stderr]    Compiling zerocopy v0.8.57
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.21
[INFO] [stderr]    Compiling libm v0.2.16
[INFO] [stderr]    Compiling crossbeam-deque v0.8.8
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling rayon-core v1.13.0
[INFO] [stderr]    Compiling thiserror v2.0.20
[INFO] [stderr]    Compiling either v1.18.0
[INFO] [stderr]    Compiling rand_core v0.9.5
[INFO] [stderr]    Compiling rayon v1.12.0
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling rand_chacha v0.9.0
[INFO] [stderr]    Compiling rand v0.9.5
[INFO] [stderr]    Compiling rand_distr v0.5.1
[INFO] [stderr]    Compiling sanity-sc-rs v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [optimized + debuginfo] target(s) in 38.72s
[INFO] running `Command { std: "docker" "inspect" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [optimized + debuginfo] target(s) in 0.12s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/build/sanity-sc-rs/aa4c45f6a0d7976a/out/sanity_sc_rs-aa4c45f6a0d7976a)
[INFO] [stdout] 
[INFO] [stdout] running 35 tests
[INFO] [stdout] test input::tests::test_matrix_rejects_broken_indptr ... ok
[INFO] [stdout] test config::tests::test_grid_is_uniform_in_log ... ok
[INFO] [stdout] test config::tests::test_grid_spans_the_bounds ... ok
[INFO] [stdout] test config::tests::test_single_bin_grid_is_the_geometric_mean ... ok
[INFO] [stdout] test input::tests::test_matrix_rejects_zero_cells ... ok
[INFO] [stdout] test input::tests::test_matrix_rejects_unsorted_cell_indices ... ok
[INFO] [stdout] test input::tests::test_matrix_rejects_out_of_bounds_cell ... ok
[INFO] [stdout] test model::fractions::tests::test_offset_recovers_the_definition ... ok
[INFO] [stdout] test model::fractions::tests::test_fractions_sum_to_one ... ok
[INFO] [stdout] test input::tests::test_matrix_rejects_ragged_column ... ok
[INFO] [stdout] test input::tests::test_matrix_slices_genes ... ok
[INFO] [stdout] test model::likelihood::tests::test_optimum_beats_its_neighbourhood ... ok
[INFO] [stdout] test model::fractions::tests::test_stationarity_condition_holds ... ok
[INFO] [stdout] test model::likelihood::tests::test_log_determinant_matches_dense_matrix ... ok
[INFO] [stdout] test model::variance::tests::test_empty_cell_variance_is_bounded_by_the_prior ... ok
[INFO] [stdout] test model::variance::tests::test_empty_cell_variance_hits_the_half_unit_drop ... ok
[INFO] [stdout] test model::empty_cells::tests::test_shift_table_sums_directly_above_its_domain ... ok
[INFO] [stdout] test model::variance::tests::test_gaussian_variance_matches_dense_inverse ... ok
[INFO] [stdout] test simulate::tests::test_branched_walk_matches_assigned_variance ... ok
[INFO] [stdout] test simulate::tests::test_simulation_is_reproducible ... ok
[INFO] [stdout] test simulate::tests::test_mean_quotients_sum_to_one ... ok
[INFO] [stdout] test input::tests::test_matrix_rejects_duplicate_cell_index ... ok
[INFO] [stdout] test utils::polygamma::tests::test_polygamma_matches_r ... ok
[INFO] [stdout] test simulate::tests::test_counts_are_sampled_around_their_rate ... ok
[INFO] [stdout] test utils::polygamma::tests::test_digamma_recurrence_is_consistent ... ok
[INFO] [stdout] test utils::wright_omega::tests::test_omega_matches_reference ... ok
[INFO] [stdout] test utils::wright_omega::tests::test_omega_satisfies_defining_equation ... ok
[INFO] [stdout] test utils::wright_omega::tests::test_omega_small_argument_does_not_underflow_to_zero ... ok
[INFO] [stdout] test utils::chebyshev::tests::test_chebyshev_reproduces_a_smooth_function ... ok
[INFO] [stdout] test model::fractions::tests::test_small_variance_limit ... ok
[INFO] [stdout] test utils::polygamma::tests::test_trigamma_recurrence_is_consistent ... ok
[INFO] [stdout] test utils::wright_omega::tests::test_omega_near_survives_a_large_jump ... ok
[INFO] [stdout] test model::likelihood::tests::test_sparse_sweep_matches_dense ... ok
[INFO] [stdout] test model::gene::tests::test_empty_cell_fit_matches_per_cell_pass ... ok
[INFO] [stdout] test model::empty_cells::tests::test_shift_table_matches_direct_sum ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 35 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.87s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/oracle.rs (/opt/rustwide/target/debug/build/sanity-sc-rs/858518085e41f06f/out/oracle-858518085e41f06f)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test test_matches_the_numpy_oracle ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/recovery.rs (/opt/rustwide/target/debug/build/sanity-sc-rs/4dd9bab463c528bf/out/recovery-4dd9bab463c528bf)
[INFO] [stdout] 
[INFO] [stdout] running 12 tests
[INFO] [stdout] test test_fixed_variance_runs_end_to_end ... ok
[INFO] [stdout] test test_rejects_a_cell_with_no_library ... ok
[INFO] [stdout] test test_rejects_a_gene_with_no_counts ... ok
[INFO] [stdout] test test_rejects_a_non_positive_fixed_variance ... ok
[INFO] [stdout] test test_single_umi_gene_stays_finite ... ok
[INFO] [stdout] test test_log_transcription_quotients_add_the_gene_mean ... ok
[INFO] [stdout] test test_error_bars_are_calibrated ... ok
[INFO] [stdout] test test_recovers_mean_log_quotients ... ok
[INFO] [stdout] test test_recovers_log_fold_changes_of_expressed_genes ... ok
[INFO] [stdout] test test_recovers_gene_variances ... ok
[INFO] [stdout] test test_f32_storage_agrees_with_f64 ... ok
[INFO] [stdout] test test_point_estimate_rules_track_the_marginalising_one ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 12 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 11.96s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/scale.rs (/opt/rustwide/target/debug/build/sanity-sc-rs/fbb9d7e27eea946a/out/scale-fbb9d7e27eea946a)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test test_uniform_totals_at_two_hundred_thousand_cells ... ignored, 200k cells, about a second in release
[INFO] [stdout] test test_uniform_totals_scale_invariant ... ok
[INFO] [stderr]      Running tests/select.rs (/opt/rustwide/target/debug/build/sanity-sc-rs/757e9df2c7533c86/out/select-757e9df2c7533c86)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.20s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test test_select_none_is_empty ... ok
[INFO] [stdout] test test_select_all_matches_sanity ... ok
[INFO] [stdout] test test_select_signal_to_noise_matches_post_hoc_filter ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.13s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests sanity_sc_rs
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513", kill_on_drop: false }`
[INFO] [stdout] a66b503b0bef6bde1479786ad35516e97cffd59b8030c855314afad575c97513
