[INFO] fetching crate rustynuc 0.3.0...
[INFO] testing rustynuc-0.3.0 against 1.99.0-beta.8 for beta-1.100-2
[INFO] extracting crate rustynuc 0.3.0 into /workspace/builds/worker-0-tc1/source
[INFO] started tweaking crates.io crate rustynuc 0.3.0
[INFO] finished tweaking crates.io crate rustynuc 0.3.0
[INFO] tweaked toml for crates.io crate rustynuc 0.3.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate rustynuc 0.3.0 on toolchain 1.99.0-beta.8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate rustynuc 0.3.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "start" "f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
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[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c: In function 'khttp_parse_url':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c:380:55: warning: unused parameter 'mode' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   380 | knetFile *khttp_parse_url(const char *fn, const char *mode)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                           ~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c: In function 'knet_dopen':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c:518:42: warning: unused parameter 'mode' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   518 | knetFile *knet_dopen(int fd, const char *mode)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                              ~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/synced_bcf_reader.h:60,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.h:37,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:30:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kstring.c: In function 'kvsprintf':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kstring.c:158:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   158 |         if (l + 1 > s->m - s->l) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c: In function 'kbs_bitwise_or':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:55:16: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:    55 |     for (i=0; i<dst->n; i++) dst->b[i] |= src->b[i];
[INFO] [stderr] warning: hts-sys@1.10.3:       |                ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c: In function 'bcf_sr_sort_set':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:351:17: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   351 |     for (k=0; k < kh_end(hash); k++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                 ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:354:17: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   354 |     for (k=0; k < kh_end(hash); k++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                 ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c: In function 'bcf_sr_sort_remove_reader':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:629:43: warning: unused parameter 'readers' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   629 | void bcf_sr_sort_remove_reader(bcf_srs_t *readers, sr_sort_t *srt, int i)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                ~~~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:46:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:48:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:50:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_gzip_compress':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:583:101: warning: unused parameter 'level' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   583 | static int bgzf_gzip_compress(BGZF *fp, void *_dst, size_t *dlen, const void *src, size_t slen, int level)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                                 ~~~~^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_read':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1113:23: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1113 |     while (bytes_read < length) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                       ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1126:43: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1126 |         copy_length = length - bytes_read < available? length - bytes_read : available;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                           ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1126:78: warning: operand of '?:' changes signedness from 'int' to 'long unsigned int' due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1126 |         copy_length = length - bytes_read < available? length - bytes_read : available;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                              ^~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_mt_writer':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1289:55: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1289 |         if (hwrite(fp->fp, j->comp_data, j->comp_len) != j->comp_len)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                       ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_mt':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1630:42: warning: unused parameter 'n_sub_blks' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:  1630 | int bgzf_mt(BGZF *fp, int n_threads, int n_sub_blks)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                      ~~~~^~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_block_write':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1870:41: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1870 |         ublock_size = current_block + 1 < fp->idx->moffs ? fp->idx->offs[current_block+1].uaddr-fp->idx->offs[current_block].uaddr : BGZF_MAX_BLOCK_SIZE;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                         ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1878:30: warning: comparison of integer expressions of different signedness: 'int' and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1878 |         if (fp->block_offset == ublock_size) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                              ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_useek':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:2391:22: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2391 |         if ( uoffset < fp->idx->offs[i].uaddr ) ihi = i - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                      ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:2392:27: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2392 |         else if ( uoffset >= fp->idx->offs[i].uaddr ) ilo = i + 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                           ^~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:41:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:44:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c: In function 'fai_retrieve':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:727:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   727 |     while ( l < end - beg && (c=bgzf_getc(fai->bgzf))>=0 )
[INFO] [stderr] warning: hts-sys@1.10.3:       |               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c: In function 'fai_get_val':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:763:13: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   763 |     if (beg >= val->len) beg = val->len;
[INFO] [stderr] warning: hts-sys@1.10.3:       |             ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:764:13: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   764 |     if (end >= val->len) end = val->len;
[INFO] [stderr] warning: hts-sys@1.10.3:       |             ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c: In function 'faidx_adjust_position':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:855:22: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   855 |     else if(val->len <= *p_beg_i)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                      ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:860:22: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   860 |     else if(val->len <= *p_end_i)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                      ^~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:37:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c: In function 'sam_hrecs_error':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:59:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:    59 |     for (j = 0; j < len && line[j] != '\n'; j++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:44:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:33,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:45:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hfile_set_blksize':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:211:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'ptrdiff_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   211 |     if (bufsiz < curr_used)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hseek':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:452:35: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   452 |         if (offset > 0 || -offset > length) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'fd_flush':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:570:28: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   570 | static int fd_flush(hFILE *fpv)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                     ~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'mem_seek':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:760:30: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                       ~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:760:41: warning: unused parameter 'offset' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ~~~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:760:53: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                 ~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'mem_close':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:766:29: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   766 | static int mem_close(hFILE *fpv)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                      ~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hopenv_mem':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:828:38: warning: unused parameter 'filename' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   828 | static hFILE *hopenv_mem(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                          ~~~~~~~~~~~~^~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'try_exe_add_scheme_handler':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:946:51: warning: unused parameter 'scheme' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   946 | static int try_exe_add_scheme_handler(const char *scheme,
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                       ~~~~~~~~~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:947:74: warning: unused parameter 'handler' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   947 |                                       const struct hFILE_scheme_handler *handler)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'load_hfile_plugins':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:998:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning: hts-sys@1.10.3:   998 |         data = { hopen_mem, hfile_always_local, "built-in", 80 },
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning: hts-sys@1.10.3:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:999:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning: hts-sys@1.10.3:   999 |         file = { hopen_fd_fileuri, hfile_always_local, "built-in", 80 },
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning: hts-sys@1.10.3:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1000:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning: hts-sys@1.10.3:  1000 |         preload = { hopen_preload, is_preload_url_remote, "built-in", 80 };
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning: hts-sys@1.10.3:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'find_scheme_handler':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1061:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning: hts-sys@1.10.3:  1061 |         { hopen_unknown_scheme, hfile_always_local, "built-in", 0 };
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning: hts-sys@1.10.3:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1066:19: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1066 |     for (i = 0; i < sizeof scheme; i++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1073:21: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1073 |     if (i <= 1 || i >= sizeof scheme) return NULL;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                     ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hfile_always_local':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1107:37: warning: unused parameter 'fname' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:  1107 | int hfile_always_local (const char *fname) { return 0; }
[INFO] [stderr] warning: hts-sys@1.10.3:       |                         ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hfile_always_remote':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1110:37: warning: unused parameter 'fname' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:  1110 | int hfile_always_remote(const char *fname) { return 1; }
[INFO] [stderr] warning: hts-sys@1.10.3:       |                         ~~~~~~~~~~~~^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c: In function 'check_for_name_update':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:1493:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1493 |     if        (rec->type == TYPEKEY("SQ")) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                          ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:1495:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1495 |     } else if (rec->type == TYPEKEY("RG")) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                          ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:1497:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1497 |     } else if (rec->type == TYPEKEY("PG")) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                          ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c: In function 'sam_hrecs_remove_key':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:2577:20: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2577 |     if (type->type == TYPEKEY("SQ") && tag->str[0] == 'A' && tag->str[1] == 'N') {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                    ^~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.c:30:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:33:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.c: In function 'hfile_plugin_init_net':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.c:106:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr] warning: hts-sys@1.10.3:   106 |         { hopen_net, hfile_always_remote, "knetfile", 0 };
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr] warning: hts-sys@1.10.3:   131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:44:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h:296:43: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:52:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning: hts-sys@1.10.3:       |                    ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                            ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:45:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:46:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:48:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_open_format':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:612:33: warning: initialization discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr] warning: hts-sys@1.10.3:   612 |     char *rmme = NULL, *fnidx = strstr(fn, HTS_IDX_DELIM);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                 ^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_hopen':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1018:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr] warning: hts-sys@1.10.3:  1018 |     if ((cp = strchr(mode, ','))) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |             ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'update_loff':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1667:34: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1667 |             if ( kh_key(bidx, k) < idx->n_bins )
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'compress_binning':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1694:55: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1694 |             if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins || kh_key(bidx, k) < start) continue;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                       ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1724:51: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1724 |         if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins) continue;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                   ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_read_core':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2121:60: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2121 |             if (bgzf_read(fp, p->list, ((size_t) p->n)<<4) != ((size_t) p->n)<<4) return -1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                            ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_read':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2161:33: warning: comparison of promoted bitwise complement of an unsigned value with constant [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2161 |             if (SIZE_MAX - x[2] < 1) goto fail; // Prevent possible overflow
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                 ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_bam':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2589:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2589 |             for(j=0; j<curr_reg->count; j++) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                       ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_cram':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2701:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2701 |             for (j=0; j < curr_reg->count; j++) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                         ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_next':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3340:17: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3340 |         if (beg >  iter->off[iter->i].max) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                 ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3347:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3347 |         for (i = ci; i < iter->reg_list[cr].count; i++) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_test_and_fetch':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3429:49: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3429 |                 if (fwrite(buf, 1, l, local_fp) != l) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                 ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_find_and_load':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3632:19: warning: initialization discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr] warning: hts-sys@1.10.3:  3632 |     char *fnidx = strstr(fn, HTS_IDX_DELIM);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_realloc_or_die':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3740:62: warning: unused parameter 'func' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:  3740 |                           int clear, void **ptr, const char *func) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                  ~~~~~~~~~~~~^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_log':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3891:18: warning: comparison of integer expressions of different signedness: 'enum htsLogLevel' and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3891 |     if (severity <= hts_verbose) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                  ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_opt_add':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:778:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning: hts-sys@1.10.3:   778 |         case 'g': case 'G': o->val.i *= 1024;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:779:9: note: here
[INFO] [stderr] warning: hts-sys@1.10.3:   779 |         case 'm': case 'M': o->val.i *= 1024;
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:779:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning: hts-sys@1.10.3:   779 |         case 'm': case 'M': o->val.i *= 1024;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ~~~~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:780:9: note: here
[INFO] [stderr] warning: hts-sys@1.10.3:   780 |         case 'k': case 'K': o->val.i *= 1024; break;
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_bam':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2572:36: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr] warning: hts-sys@1.10.3:  2572 |                     iter->finished = 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                     ~~~~~~~~~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2573:17: note: here
[INFO] [stderr] warning: hts-sys@1.10.3:  2573 |                 case HTS_IDX_START:
[INFO] [stderr] warning: hts-sys@1.10.3:       |                 ^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/md5.c:54:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:34:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:35:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c: In function 'multipart_write':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:114:39: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                ~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:114:56: warning: unused parameter 'buffer' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                            ~~~~~~~~~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:114:71: warning: unused parameter 'nbytes' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                ~~~~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c: In function 'multipart_seek':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:120:36: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:120:47: warning: unused parameter 'offset' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                         ~~~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:120:59: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                       ~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c: In function 'probaln_glocal':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c:179:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   179 |             if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                            ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c:203:24: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   203 |         if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c:241:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   241 |             if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                            ^~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/synced_bcf_reader.h:60,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/synced_bcf_reader.c:36:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:48,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:46:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h:296:43: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:52:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr] warning: hts-sys@1.10.3:       |                    ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                            ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:47:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:49:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:50:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_hdr_read':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:255:15: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   255 |     if (bytes != h->l_text) goto read_err;
[INFO] [stderr] warning: hts-sys@1.10.3:       |               ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_realloc_bam_data':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:425:34: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   425 |                        b->l_data < b->m_data ? b->l_data : b->m_data);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:425:48: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   425 |                        b->l_data < b->m_data ? b->l_data : b->m_data);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                ^~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_tag2cigar':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:524:81: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   524 |     if (bam_cigar_op(cigar0[0]) != BAM_CSOFT_CLIP || bam_cigar_oplen(cigar0[0]) != c->l_qseq) return 0;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                 ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'swap_data':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:569:49: warning: unused parameter 'l_data' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   569 | static void swap_data(const bam1_core_t *c, int l_data, uint8_t *data, int is_host)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                             ~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:569:76: warning: unused parameter 'is_host' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   569 | static void swap_data(const bam1_core_t *c, int l_data, uint8_t *data, int is_host)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                        ~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_write1':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:726:32: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   726 |     return ok? 4 + block_len : -1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_readrec':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:947:30: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   947 | static int sam_readrec(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_readrec_rest':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:35: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:70: warning: unused parameter 'tid' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                 ~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:86: warning: unused parameter 'beg' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                           ~~~~~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:102: warning: unused parameter 'end' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                           ~~~~~~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'cram_readrec':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:971:31: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   971 | static int cram_readrec(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                         ~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'cram_pseek':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:989:53: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   989 | static int cram_pseek(void *fp, int64_t offset, int whence)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                 ~~~~^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_hdr_write':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1622:19: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1622 |         if (bytes != l_text)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1642:27: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1642 |                 if (bytes != fp->line.l)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                           ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'old_sam_hdr_change_HD':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1684:36: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1684 |                     && strlen(val) == end - beg - 4)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                    ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_parse1':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2015:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2015 |         for (i = 0; i < c->n_cigar; ++i) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                       ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2067:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2067 |         for (; i < c->l_qseq; ++i)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                  ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2077:38: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  2077 |         _parse_err(s->l - (p - s->s) < c->l_qseq
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                      ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1950:40: note: in definition of macro '_parse_err'
[INFO] [stderr] warning: hts-sys@1.10.3:  1950 | #define _parse_err(cond, msg) do { if (cond) { hts_log_error(msg); goto err_ret; } } while (0)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                        ^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1928:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  1928 |         for (i<<=3; i < (l); ++i) {                             \
[INFO] [stderr] warning: hts-sys@1.10.3:       |                       ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2080:9: note: in expansion of macro 'COPY_MINUS_N'
[INFO] [stderr] warning: hts-sys@1.10.3:  2080 |         COPY_MINUS_N(t, p, 33, c->l_qseq, failed);
[INFO] [stderr] warning: hts-sys@1.10.3:       |         ^~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_state_destroy':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2331:21: error: implicit declaration of function 'usleep' [-Wimplicit-function-declaration]
[INFO] [stderr] warning: hts-sys@1.10.3:  2331 |                     usleep(10000);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                     ^~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_parse_eof':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2477:34: warning: unused parameter 'arg' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:  2477 | static void *sam_parse_eof(void *arg) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                            ~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_format1_append':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3010:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3010 |         for (i = 0; i < c->n_cigar; ++i) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                       ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3125:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3125 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(*(int8_t*)s, str); ++s;}
[INFO] [stderr] warning: hts-sys@1.10.3:       |                               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3129:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3129 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(*(uint8_t*)s, str); ++s;}
[INFO] [stderr] warning: hts-sys@1.10.3:       |                               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3133:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3133 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_i16(s), str); s += 2; }
[INFO] [stderr] warning: hts-sys@1.10.3:       |                               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3137:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3137 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_u16(s), str); s += 2; }
[INFO] [stderr] warning: hts-sys@1.10.3:       |                               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3141:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3141 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_i32(s), str); s += 4; }
[INFO] [stderr] warning: hts-sys@1.10.3:       |                               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3145:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3145 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputuw(le_to_u32(s), str); s += 4; }
[INFO] [stderr] warning: hts-sys@1.10.3:       |                               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3149:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3149 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputd(le_to_float(s), str); s += 4; }
[INFO] [stderr] warning: hts-sys@1.10.3:       |                               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_write1':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3281:70: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3281 |                 if ( bgzf_write(fp->fp.bgzf, fp->line.s, fp->line.l) != fp->line.l ) return -1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                      ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3283:67: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3283 |                 if ( hwrite(fp->fp.hfile, fp->line.s, fp->line.l) != fp->line.l ) return -1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                   ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_aux_append':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3367:40: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3367 |     if (new_len > INT32_MAX || new_len < b->l_data) goto nomem;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                        ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_open_mode_opts':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3809:15: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr] warning: hts-sys@1.10.3:  3809 |     if ((opts = strchr(format, ','))) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |               ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'resolve_cigar2':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3980:52: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3980 |             for (k = 0, s->x = c->pos, s->y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                    ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3898:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3987:22: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3987 |             assert(k < c->n_cigar);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                      ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3993:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  3993 |             assert(s->k < c->n_cigar); // otherwise a bug: this function should not be called in this case
[INFO] [stderr] warning: hts-sys@1.10.3:       |                         ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4002:38: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4002 |                 for (k = s->k + 1; k < c->n_cigar; ++k) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                      ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4009:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4009 |             assert(s->k < c->n_cigar); // otherwise a bug
[INFO] [stderr] warning: hts-sys@1.10.3:       |                         ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4016:45: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4016 |         if (s->x + l - 1 == pos && s->k + 1 < c->n_cigar) { // peek the next operation
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                             ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4021:50: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4021 |             else if (op2 == BAM_CPAD && s->k + 2 < c->n_cigar) { // no working for adjacent padding
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                  ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4023:38: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4023 |                 for (k = s->k + 2; k < c->n_cigar; ++k) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                      ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_plp_insertion':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4073:14: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4073 |     while (k < p->b->core.n_cigar) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4093:14: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4093 |     while (k < p->b->core.n_cigar) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4097:27: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4097 |             for (l = 0; l < (cigar[k]>>BAM_CIGAR_SHIFT); l++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                           ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4101:27: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4101 |             for (l = 0; l < (cigar[k]>>BAM_CIGAR_SHIFT); l++, j++) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                           ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_mplp64_auto':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4672:30: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4672 |             if (iter->tid[i] < new_min_tid) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                              ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4675:37: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:  4675 |             } else if (iter->tid[i] == new_min_tid && iter->pos[i] < new_min_pos) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                     ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c: In function 'sam_cap_mapq':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:49:35: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:    49 |     for (i = y = 0, x = c->pos; i < c->n_cigar; ++i) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c: In function 'realn_check_tag':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:98:24: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:    98 |     if (b->core.l_qseq != strlen((const char *) tg + 1)) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c: In function 'sam_prob_realn':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:161:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   161 |     for (k = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:191:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   191 |         if (extend_baq && lref < c->l_qseq)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:224:46: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   224 |             for (k = 0, x = c->pos, y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                              ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:251:46: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   251 |             for (k = 0, x = c->pos, y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                              ^
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:34:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_push':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:153:14: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'long long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   153 |     if ( beg > MAX_COOR_0 ) beg = MAX_COOR_0;
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:154:14: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'long long unsigned int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   154 |     if ( end > MAX_COOR_0 ) end = MAX_COOR_0;
[INFO] [stderr] warning: hts-sys@1.10.3:       |              ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:184:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   184 |         if ( mreg != list->mreg ) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_destroy':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:318:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   318 |             for (j=0; j<list->nreg; j++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'reglist_build_index_':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:342:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   342 |             for (i=0; i<list->nreg; i++) ptr[i] = list->reg + i;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:347:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   347 |             for (i=0; i<list->nreg; i++) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:358:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   358 |             for (i=0; i<list->nreg; i++) {
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:376:18: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   376 |         if (midx <= iend) midx = iend;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                  ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:391:27: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   391 |             for (k=ibeg; k<=iend; k++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                           ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_overlap':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:422:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   422 |         if ( ibeg >= list->nidx ) return 0;     // beg is too big
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:429:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   429 |             if ( iend > list->nidx ) iend = list->nidx;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                       ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:430:27: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   430 |             for (i=ibeg; i<=iend; i++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                           ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:432:19: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   432 |             if ( i>iend ) return 0;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:435:28: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   435 |         for (ireg=i-1; ireg<list->nreg; ireg++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                            ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:441:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   441 |         if ( ireg >= list->nreg ) return 0;   // no match
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_parse_bed':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:464:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   464 | int regidx_parse_bed(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:464:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   464 | int regidx_parse_bed(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                                                       ~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_parse_tab':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:496:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   496 | int regidx_parse_tab(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:496:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   496 | int regidx_parse_tab(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                                                       ~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_parse_reg':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:570:42: warning: operand of '?:' changes signedness from 'hts_pos_t' {aka 'long int'} to 'long long unsigned int' due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   570 |         *end = se[0]=='-' ? MAX_COOR_0 : *beg;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                          ^~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:543:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   543 | int regidx_parse_reg(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:543:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr] warning: hts-sys@1.10.3:   543 | int regidx_parse_reg(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                                                                                       ~~~~~~^~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regitr_overlap':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:626:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   626 |     for (i=itr->ireg; i<list->nreg; i++)
[INFO] [stderr] warning: hts-sys@1.10.3:       |                        ^
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:632:12: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   632 |     if ( i >= list->nreg ) return 0;   // no match
[INFO] [stderr] warning: hts-sys@1.10.3:       |            ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regitr_loop':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:658:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   658 |     if ( iseq >= regidx->nseq ) return 0;
[INFO] [stderr] warning: hts-sys@1.10.3:       |               ^~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:663:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   663 |         if ( iseq >= regidx->nseq ) return 0; // no more sequences, done
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~
[INFO] [stderr] warning: hts-sys@1.10.3: In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf.h:43,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf_sweep.h:30,
[INFO] [stderr] warning: hts-sys@1.10.3:                  from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.c:28:
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr] warning: hts-sys@1.10.3:       |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.c: In function 'bcf_sweep_fwd':
[INFO] [stderr] warning: hts-sys@1.10.3: /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.c:169:53: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
[INFO] [stderr] warning: hts-sys@1.10.3:   169 |         if ( !sw->nidx || pos - sw->idx[sw->nidx-1] > sw->block_size )
[INFO] [stderr] warning: hts-sys@1.10.3:       |                                                     ^
[INFO] [stderr] error: failed to run custom build command for `hts-sys v1.10.3`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/hts-sys-aaf77109e9b7474c/build-script-build` (exit status: 1)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   copying...
[INFO] [stderr]   cargo:rerun-if-changed=htslib/kfunc.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/knetfile.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/kstring.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/bcf_sr_sort.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/bgzf.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/errmod.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/faidx.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/header.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/hfile.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/hfile_net.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/hts.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/hts_os.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/md5.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/multipart.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/probaln.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/realn.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/regidx.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/region.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/sam.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/synced_bcf_reader.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/vcf_sweep.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/tbx.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/textutils.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/thread_pool.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/vcf.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/vcfutils.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_codecs.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_decode.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_encode.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_external.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_index.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_io.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_samtools.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/cram_stats.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/mFILE.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/open_trace_file.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/pooled_alloc.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/rANS_static.c
[INFO] [stderr]   cargo:rerun-if-changed=htslib/cram/string_alloc.c
[INFO] [stderr]   TARGET = Some("x86_64-unknown-linux-gnu")
[INFO] [stderr]   OPT_LEVEL = Some("0")
[INFO] [stderr]   HOST = Some("x86_64-unknown-linux-gnu")
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   CC = None
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   DEBUG = Some("true")
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kfunc.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kfunc.c"
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c"
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kstring.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kstring.c"
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c"
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c"
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c: In function 'khttp_parse_url':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c:380:55: warning: unused parameter 'mode' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  380 | knetFile *khttp_parse_url(const char *fn, const char *mode)
[INFO] [stderr]   cargo:warning=      |                                           ~~~~~~~~~~~~^~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c: In function 'knet_dopen':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/knetfile.c:518:42: warning: unused parameter 'mode' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  518 | knetFile *knet_dopen(int fd, const char *mode)
[INFO] [stderr]   cargo:warning=      |                              ~~~~~~~~~~~~^~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf.h:43,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/synced_bcf_reader.h:60,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.h:37,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:30:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr]   cargo:warning=      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kstring.c: In function 'kvsprintf':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/kstring.c:158:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  158 |         if (l + 1 > s->m - s->l) {
[INFO] [stderr]   cargo:warning=      |                   ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c: In function 'kbs_bitwise_or':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:55:16: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=   55 |     for (i=0; i<dst->n; i++) dst->b[i] |= src->b[i];
[INFO] [stderr]   cargo:warning=      |                ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c: In function 'bcf_sr_sort_set':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:351:17: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  351 |     for (k=0; k < kh_end(hash); k++)
[INFO] [stderr]   cargo:warning=      |                 ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:354:17: warning: comparison of integer expressions of different signedness: 'int' and 'khint_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  354 |     for (k=0; k < kh_end(hash); k++)
[INFO] [stderr]   cargo:warning=      |                 ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c: In function 'bcf_sr_sort_remove_reader':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bcf_sr_sort.c:629:43: warning: unused parameter 'readers' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  629 | void bcf_sr_sort_remove_reader(bcf_srs_t *readers, sr_sort_t *srt, int i)
[INFO] [stderr]   cargo:warning=      |                                ~~~~~~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:46:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:48:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr]   cargo:warning=      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:50:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_gzip_compress':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:583:101: warning: unused parameter 'level' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  583 | static int bgzf_gzip_compress(BGZF *fp, void *_dst, size_t *dlen, const void *src, size_t slen, int level)
[INFO] [stderr]   cargo:warning=      |                                                                                                 ~~~~^~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_read':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1113:23: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1113 |     while (bytes_read < length) {
[INFO] [stderr]   cargo:warning=      |                       ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1126:43: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1126 |         copy_length = length - bytes_read < available? length - bytes_read : available;
[INFO] [stderr]   cargo:warning=      |                                           ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1126:78: warning: operand of '?:' changes signedness from 'int' to 'long unsigned int' due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1126 |         copy_length = length - bytes_read < available? length - bytes_read : available;
[INFO] [stderr]   cargo:warning=      |                                                                              ^~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_mt_writer':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1289:55: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1289 |         if (hwrite(fp->fp, j->comp_data, j->comp_len) != j->comp_len)
[INFO] [stderr]   cargo:warning=      |                                                       ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_mt':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1630:42: warning: unused parameter 'n_sub_blks' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning= 1630 | int bgzf_mt(BGZF *fp, int n_threads, int n_sub_blks)
[INFO] [stderr]   cargo:warning=      |                                      ~~~~^~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_block_write':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1870:41: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1870 |         ublock_size = current_block + 1 < fp->idx->moffs ? fp->idx->offs[current_block+1].uaddr-fp->idx->offs[current_block].uaddr : BGZF_MAX_BLOCK_SIZE;
[INFO] [stderr]   cargo:warning=      |                                         ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:1878:30: warning: comparison of integer expressions of different signedness: 'int' and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1878 |         if (fp->block_offset == ublock_size) {
[INFO] [stderr]   cargo:warning=      |                              ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c: In function 'bgzf_useek':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:2391:22: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2391 |         if ( uoffset < fp->idx->offs[i].uaddr ) ihi = i - 1;
[INFO] [stderr]   cargo:warning=      |                      ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/bgzf.c:2392:27: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2392 |         else if ( uoffset >= fp->idx->offs[i].uaddr ) ilo = i + 1;
[INFO] [stderr]   cargo:warning=      |                           ^~
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/errmod.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/errmod.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c"
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:41:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:44:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c: In function 'fai_retrieve':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:727:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  727 |     while ( l < end - beg && (c=bgzf_getc(fai->bgzf))>=0 )
[INFO] [stderr]   cargo:warning=      |               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c: In function 'fai_get_val':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:763:13: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  763 |     if (beg >= val->len) beg = val->len;
[INFO] [stderr]   cargo:warning=      |             ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:764:13: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  764 |     if (end >= val->len) end = val->len;
[INFO] [stderr]   cargo:warning=      |             ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c: In function 'faidx_adjust_position':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:855:22: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  855 |     else if(val->len <= *p_beg_i)
[INFO] [stderr]   cargo:warning=      |                      ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/faidx.c:860:22: warning: comparison of integer expressions of different signedness: 'uint64_t' {aka 'long unsigned int'} and 'hts_pos_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  860 |     else if(val->len <= *p_end_i)
[INFO] [stderr]   cargo:warning=      |                      ^~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:37:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c: In function 'sam_hrecs_error':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:59:19: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=   59 |     for (j = 0; j < len && line[j] != '\n'; j++)
[INFO] [stderr]   cargo:warning=      |                   ^
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c"
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:44:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:33,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:45:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hfile_set_blksize':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:211:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'ptrdiff_t' {aka 'long int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  211 |     if (bufsiz < curr_used)
[INFO] [stderr]   cargo:warning=      |                ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hseek':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:452:35: warning: comparison of integer expressions of different signedness: 'off_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  452 |         if (offset > 0 || -offset > length) {
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'fd_flush':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:570:28: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  570 | static int fd_flush(hFILE *fpv)
[INFO] [stderr]   cargo:warning=      |                     ~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'mem_seek':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:760:30: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr]   cargo:warning=      |                       ~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:760:41: warning: unused parameter 'offset' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr]   cargo:warning=      |                                   ~~~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:760:53: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  760 | static off_t mem_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr]   cargo:warning=      |                                                 ~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'mem_close':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:766:29: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  766 | static int mem_close(hFILE *fpv)
[INFO] [stderr]   cargo:warning=      |                      ~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hopenv_mem':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:828:38: warning: unused parameter 'filename' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  828 | static hFILE *hopenv_mem(const char *filename, const char *mode, va_list args)
[INFO] [stderr]   cargo:warning=      |                          ~~~~~~~~~~~~^~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'try_exe_add_scheme_handler':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:946:51: warning: unused parameter 'scheme' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  946 | static int try_exe_add_scheme_handler(const char *scheme,
[INFO] [stderr]   cargo:warning=      |                                       ~~~~~~~~~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:947:74: warning: unused parameter 'handler' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  947 |                                       const struct hFILE_scheme_handler *handler)
[INFO] [stderr]   cargo:warning=      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'load_hfile_plugins':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:998:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr]   cargo:warning=  998 |         data = { hopen_mem, hfile_always_local, "built-in", 80 },
[INFO] [stderr]   cargo:warning=      |         ^~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr]   cargo:warning=  131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr]   cargo:warning=      |              ^~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:999:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr]   cargo:warning=  999 |         file = { hopen_fd_fileuri, hfile_always_local, "built-in", 80 },
[INFO] [stderr]   cargo:warning=      |         ^~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr]   cargo:warning=  131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr]   cargo:warning=      |              ^~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1000:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr]   cargo:warning= 1000 |         preload = { hopen_preload, is_preload_url_remote, "built-in", 80 };
[INFO] [stderr]   cargo:warning=      |         ^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr]   cargo:warning=  131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr]   cargo:warning=      |              ^~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'find_scheme_handler':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1061:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr]   cargo:warning= 1061 |         { hopen_unknown_scheme, hfile_always_local, "built-in", 0 };
[INFO] [stderr]   cargo:warning=      |         ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr]   cargo:warning=  131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr]   cargo:warning=      |              ^~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1066:19: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1066 |     for (i = 0; i < sizeof scheme; i++)
[INFO] [stderr]   cargo:warning=      |                   ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1073:21: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1073 |     if (i <= 1 || i >= sizeof scheme) return NULL;
[INFO] [stderr]   cargo:warning=      |                     ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hfile_always_local':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1107:37: warning: unused parameter 'fname' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning= 1107 | int hfile_always_local (const char *fname) { return 0; }
[INFO] [stderr]   cargo:warning=      |                         ~~~~~~~~~~~~^~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c: In function 'hfile_always_remote':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile.c:1110:37: warning: unused parameter 'fname' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning= 1110 | int hfile_always_remote(const char *fname) { return 1; }
[INFO] [stderr]   cargo:warning=      |                         ~~~~~~~~~~~~^~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c: In function 'check_for_name_update':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:1493:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1493 |     if        (rec->type == TYPEKEY("SQ")) {
[INFO] [stderr]   cargo:warning=      |                          ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:1495:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1495 |     } else if (rec->type == TYPEKEY("RG")) {
[INFO] [stderr]   cargo:warning=      |                          ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:1497:26: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1497 |     } else if (rec->type == TYPEKEY("PG")) {
[INFO] [stderr]   cargo:warning=      |                          ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c: In function 'sam_hrecs_remove_key':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/header.c:2577:20: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2577 |     if (type->type == TYPEKEY("SQ") && tag->str[0] == 'A' && tag->str[1] == 'N') {
[INFO] [stderr]   cargo:warning=      |                    ^~
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c"
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.c:30:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:33:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.c: In function 'hfile_plugin_init_net':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_net.c:106:9: warning: missing initializer for field 'vopen' of 'const struct hFILE_scheme_handler' [-Wmissing-field-initializers]
[INFO] [stderr]   cargo:warning=  106 |         { hopen_net, hfile_always_remote, "knetfile", 0 };
[INFO] [stderr]   cargo:warning=      |         ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:131:14: note: 'vopen' declared here
[INFO] [stderr]   cargo:warning=  131 |     hFILE *(*vopen)(const char *filename, const char *mode, va_list args)
[INFO] [stderr]   cargo:warning=      |              ^~~~~
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:48,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:44:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h:296:43: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr]   cargo:warning=      |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:52:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr]   cargo:warning=      |                    ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr]   cargo:warning=      |                                                            ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:45:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:46:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr]   cargo:warning=      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:48:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_os.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_os.c"
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_open_format':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:612:33: warning: initialization discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr]   cargo:warning=  612 |     char *rmme = NULL, *fnidx = strstr(fn, HTS_IDX_DELIM);
[INFO] [stderr]   cargo:warning=      |                                 ^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_hopen':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1018:13: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr]   cargo:warning= 1018 |     if ((cp = strchr(mode, ','))) {
[INFO] [stderr]   cargo:warning=      |             ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'update_loff':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1667:34: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1667 |             if ( kh_key(bidx, k) < idx->n_bins )
[INFO] [stderr]   cargo:warning=      |                                  ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'compress_binning':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1694:55: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1694 |             if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins || kh_key(bidx, k) < start) continue;
[INFO] [stderr]   cargo:warning=      |                                                       ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:1724:51: warning: comparison of integer expressions of different signedness: 'khint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1724 |         if (!kh_exist(bidx, k) || kh_key(bidx, k) >= idx->n_bins) continue;
[INFO] [stderr]   cargo:warning=      |                                                   ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_read_core':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2121:60: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'long unsigned int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2121 |             if (bgzf_read(fp, p->list, ((size_t) p->n)<<4) != ((size_t) p->n)<<4) return -1;
[INFO] [stderr]   cargo:warning=      |                                                            ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_read':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2161:33: warning: comparison of promoted bitwise complement of an unsigned value with constant [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2161 |             if (SIZE_MAX - x[2] < 1) goto fail; // Prevent possible overflow
[INFO] [stderr]   cargo:warning=      |                                 ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_bam':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2589:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2589 |             for(j=0; j<curr_reg->count; j++) {
[INFO] [stderr]   cargo:warning=      |                       ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_cram':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2701:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2701 |             for (j=0; j < curr_reg->count; j++) {
[INFO] [stderr]   cargo:warning=      |                         ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_next':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3340:17: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'uint64_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3340 |         if (beg >  iter->off[iter->i].max) {
[INFO] [stderr]   cargo:warning=      |                 ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3347:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3347 |         for (i = ci; i < iter->reg_list[cr].count; i++) {
[INFO] [stderr]   cargo:warning=      |                        ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_test_and_fetch':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3429:49: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3429 |                 if (fwrite(buf, 1, l, local_fp) != l) {
[INFO] [stderr]   cargo:warning=      |                                                 ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'idx_find_and_load':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3632:19: warning: initialization discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr]   cargo:warning= 3632 |     char *fnidx = strstr(fn, HTS_IDX_DELIM);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_realloc_or_die':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3740:62: warning: unused parameter 'func' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning= 3740 |                           int clear, void **ptr, const char *func) {
[INFO] [stderr]   cargo:warning=      |                                                  ~~~~~~~~~~~~^~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_log':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:3891:18: warning: comparison of integer expressions of different signedness: 'enum htsLogLevel' and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3891 |     if (severity <= hts_verbose) {
[INFO] [stderr]   cargo:warning=      |                  ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_opt_add':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:778:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr]   cargo:warning=  778 |         case 'g': case 'G': o->val.i *= 1024;
[INFO] [stderr]   cargo:warning=      |                             ~~~~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:779:9: note: here
[INFO] [stderr]   cargo:warning=  779 |         case 'm': case 'M': o->val.i *= 1024;
[INFO] [stderr]   cargo:warning=      |         ^~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:779:38: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr]   cargo:warning=  779 |         case 'm': case 'M': o->val.i *= 1024;
[INFO] [stderr]   cargo:warning=      |                             ~~~~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:780:9: note: here
[INFO] [stderr]   cargo:warning=  780 |         case 'k': case 'K': o->val.i *= 1024; break;
[INFO] [stderr]   cargo:warning=      |         ^~~~
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/md5.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/md5.c"
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c: In function 'hts_itr_multi_bam':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2572:36: warning: this statement may fall through [-Wimplicit-fallthrough=]
[INFO] [stderr]   cargo:warning= 2572 |                     iter->finished = 1;
[INFO] [stderr]   cargo:warning=      |                     ~~~~~~~~~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts.c:2573:17: note: here
[INFO] [stderr]   cargo:warning= 2573 |                 case HTS_IDX_START:
[INFO] [stderr]   cargo:warning=      |                 ^~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/md5.c:54:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr]   cargo:warning=      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:34:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hfile_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:35:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c: In function 'multipart_write':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:114:39: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr]   cargo:warning=      |                                ~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:114:56: warning: unused parameter 'buffer' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr]   cargo:warning=      |                                            ~~~~~~~~~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:114:71: warning: unused parameter 'nbytes' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  114 | static ssize_t multipart_write(hFILE *fpv, const void *buffer, size_t nbytes)
[INFO] [stderr]   cargo:warning=      |                                                                ~~~~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c: In function 'multipart_seek':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:120:36: warning: unused parameter 'fpv' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr]   cargo:warning=      |                             ~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:120:47: warning: unused parameter 'offset' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr]   cargo:warning=      |                                         ~~~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/multipart.c:120:59: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  120 | static off_t multipart_seek(hFILE *fpv, off_t offset, int whence)
[INFO] [stderr]   cargo:warning=      |                                                       ~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c: In function 'probaln_glocal':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c:179:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  179 |             if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr]   cargo:warning=      |                            ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c:203:24: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  203 |         if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr]   cargo:warning=      |                        ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/probaln.c:241:28: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  241 |             if (u < 3 || u >= i_dim - 3) continue;
[INFO] [stderr]   cargo:warning=      |                            ^~
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/region.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/region.c"
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c"
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/synced_bcf_reader.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/synced_bcf_reader.c"
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf.h:43,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/synced_bcf_reader.h:60,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/synced_bcf_reader.c:36:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr]   cargo:warning=      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:48,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:46:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h: In function 'safe_itf8_get':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_io.h:296:43: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  296 |         *val_p = uv < 0x80000000UL ? uv : -((int32_t) (0xffffffffUL - uv)) - 1;
[INFO] [stderr]   cargo:warning=      |                                           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram.h:52:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h: In function 'cram_not_enough_bits':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:164:20: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  164 |         (blk->byte >= blk->uncomp_size && nbits > 0) ||
[INFO] [stderr]   cargo:warning=      |                    ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/cram/cram_codecs.h:166:60: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  166 |          (blk->uncomp_size - blk->byte) * 8 + blk->bit - 7 < nbits)) {
[INFO] [stderr]   cargo:warning=      |                                                            ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:47:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:49:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h: In function 'hwrite':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hfile.h:271:35: warning: comparison of integer expressions of different signedness: 'long int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  271 |         if (fp->limit - fp->begin < nbytes){
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:50:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr]   cargo:warning=      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_hdr_read':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:255:15: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  255 |     if (bytes != h->l_text) goto read_err;
[INFO] [stderr]   cargo:warning=      |               ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_realloc_bam_data':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:425:34: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  425 |                        b->l_data < b->m_data ? b->l_data : b->m_data);
[INFO] [stderr]   cargo:warning=      |                                  ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:425:48: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  425 |                        b->l_data < b->m_data ? b->l_data : b->m_data);
[INFO] [stderr]   cargo:warning=      |                                                ^~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_tag2cigar':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:524:81: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  524 |     if (bam_cigar_op(cigar0[0]) != BAM_CSOFT_CLIP || bam_cigar_oplen(cigar0[0]) != c->l_qseq) return 0;
[INFO] [stderr]   cargo:warning=      |                                                                                 ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'swap_data':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:569:49: warning: unused parameter 'l_data' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  569 | static void swap_data(const bam1_core_t *c, int l_data, uint8_t *data, int is_host)
[INFO] [stderr]   cargo:warning=      |                                             ~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:569:76: warning: unused parameter 'is_host' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  569 | static void swap_data(const bam1_core_t *c, int l_data, uint8_t *data, int is_host)
[INFO] [stderr]   cargo:warning=      |                                                                        ~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_write1':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:726:32: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  726 |     return ok? 4 + block_len : -1;
[INFO] [stderr]   cargo:warning=      |                                ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_readrec':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:947:30: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  947 | static int sam_readrec(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr]   cargo:warning=      |                        ~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_readrec_rest':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:35: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr]   cargo:warning=      |                             ~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:70: warning: unused parameter 'tid' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr]   cargo:warning=      |                                                                 ~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:86: warning: unused parameter 'beg' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr]   cargo:warning=      |                                                                           ~~~~~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:962:102: warning: unused parameter 'end' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  962 | static int sam_readrec_rest(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr]   cargo:warning=      |                                                                                           ~~~~~~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'cram_readrec':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:971:31: warning: unused parameter 'ignored' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  971 | static int cram_readrec(BGZF *ignored, void *fpv, void *bv, int *tid, hts_pos_t *beg, hts_pos_t *end)
[INFO] [stderr]   cargo:warning=      |                         ~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'cram_pseek':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:989:53: warning: unused parameter 'whence' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  989 | static int cram_pseek(void *fp, int64_t offset, int whence)
[INFO] [stderr]   cargo:warning=      |                                                 ~~~~^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_hdr_write':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1622:19: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1622 |         if (bytes != l_text)
[INFO] [stderr]   cargo:warning=      |                   ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1642:27: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1642 |                 if (bytes != fp->line.l)
[INFO] [stderr]   cargo:warning=      |                           ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'old_sam_hdr_change_HD':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1684:36: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'long int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1684 |                     && strlen(val) == end - beg - 4)
[INFO] [stderr]   cargo:warning=      |                                    ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_parse1':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2015:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2015 |         for (i = 0; i < c->n_cigar; ++i) {
[INFO] [stderr]   cargo:warning=      |                       ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2067:18: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2067 |         for (; i < c->l_qseq; ++i)
[INFO] [stderr]   cargo:warning=      |                  ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2077:38: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 2077 |         _parse_err(s->l - (p - s->s) < c->l_qseq
[INFO] [stderr]   cargo:warning=      |                                      ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1950:40: note: in definition of macro '_parse_err'
[INFO] [stderr]   cargo:warning= 1950 | #define _parse_err(cond, msg) do { if (cond) { hts_log_error(msg); goto err_ret; } } while (0)
[INFO] [stderr]   cargo:warning=      |                                        ^~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:1928:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 1928 |         for (i<<=3; i < (l); ++i) {                             \
[INFO] [stderr]   cargo:warning=      |                       ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2080:9: note: in expansion of macro 'COPY_MINUS_N'
[INFO] [stderr]   cargo:warning= 2080 |         COPY_MINUS_N(t, p, 33, c->l_qseq, failed);
[INFO] [stderr]   cargo:warning=      |         ^~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_state_destroy':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2331:21: error: implicit declaration of function 'usleep' [-Wimplicit-function-declaration]
[INFO] [stderr]   cargo:warning= 2331 |                     usleep(10000);
[INFO] [stderr]   cargo:warning=      |                     ^~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_parse_eof':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:2477:34: warning: unused parameter 'arg' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning= 2477 | static void *sam_parse_eof(void *arg) {
[INFO] [stderr]   cargo:warning=      |                            ~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_format1_append':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3010:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3010 |         for (i = 0; i < c->n_cigar; ++i) {
[INFO] [stderr]   cargo:warning=      |                       ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3125:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3125 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(*(int8_t*)s, str); ++s;}
[INFO] [stderr]   cargo:warning=      |                               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3129:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3129 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(*(uint8_t*)s, str); ++s;}
[INFO] [stderr]   cargo:warning=      |                               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3133:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3133 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_i16(s), str); s += 2; }
[INFO] [stderr]   cargo:warning=      |                               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3137:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3137 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_u16(s), str); s += 2; }
[INFO] [stderr]   cargo:warning=      |                               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3141:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3141 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputw(le_to_i32(s), str); s += 4; }
[INFO] [stderr]   cargo:warning=      |                               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3145:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3145 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputuw(le_to_u32(s), str); s += 4; }
[INFO] [stderr]   cargo:warning=      |                               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3149:31: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3149 |                 for (i = 0; i < n; ++i) {r |= kputc_(',', str); r |= kputd(le_to_float(s), str); s += 4; }
[INFO] [stderr]   cargo:warning=      |                               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_write1':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3281:70: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3281 |                 if ( bgzf_write(fp->fp.bgzf, fp->line.s, fp->line.l) != fp->line.l ) return -1;
[INFO] [stderr]   cargo:warning=      |                                                                      ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3283:67: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3283 |                 if ( hwrite(fp->fp.hfile, fp->line.s, fp->line.l) != fp->line.l ) return -1;
[INFO] [stderr]   cargo:warning=      |                                                                   ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_aux_append':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3367:40: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3367 |     if (new_len > INT32_MAX || new_len < b->l_data) goto nomem;
[INFO] [stderr]   cargo:warning=      |                                        ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'sam_open_mode_opts':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3809:15: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
[INFO] [stderr]   cargo:warning= 3809 |     if ((opts = strchr(format, ','))) {
[INFO] [stderr]   cargo:warning=      |               ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'resolve_cigar2':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3980:52: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3980 |             for (k = 0, s->x = c->pos, s->y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr]   cargo:warning=      |                                                    ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3898:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3987:22: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3987 |             assert(k < c->n_cigar);
[INFO] [stderr]   cargo:warning=      |                      ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:3993:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 3993 |             assert(s->k < c->n_cigar); // otherwise a bug: this function should not be called in this case
[INFO] [stderr]   cargo:warning=      |                         ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4002:38: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4002 |                 for (k = s->k + 1; k < c->n_cigar; ++k) {
[INFO] [stderr]   cargo:warning=      |                                      ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4009:25: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4009 |             assert(s->k < c->n_cigar); // otherwise a bug
[INFO] [stderr]   cargo:warning=      |                         ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4016:45: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4016 |         if (s->x + l - 1 == pos && s->k + 1 < c->n_cigar) { // peek the next operation
[INFO] [stderr]   cargo:warning=      |                                             ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4021:50: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4021 |             else if (op2 == BAM_CPAD && s->k + 2 < c->n_cigar) { // no working for adjacent padding
[INFO] [stderr]   cargo:warning=      |                                                  ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4023:38: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4023 |                 for (k = s->k + 2; k < c->n_cigar; ++k) {
[INFO] [stderr]   cargo:warning=      |                                      ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_plp_insertion':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4073:14: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4073 |     while (k < p->b->core.n_cigar) {
[INFO] [stderr]   cargo:warning=      |              ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4093:14: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4093 |     while (k < p->b->core.n_cigar) {
[INFO] [stderr]   cargo:warning=      |              ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4097:27: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4097 |             for (l = 0; l < (cigar[k]>>BAM_CIGAR_SHIFT); l++)
[INFO] [stderr]   cargo:warning=      |                           ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4101:27: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4101 |             for (l = 0; l < (cigar[k]>>BAM_CIGAR_SHIFT); l++, j++) {
[INFO] [stderr]   cargo:warning=      |                           ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c: In function 'bam_mplp64_auto':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4672:30: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4672 |             if (iter->tid[i] < new_min_tid) {
[INFO] [stderr]   cargo:warning=      |                              ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c:4675:37: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning= 4675 |             } else if (iter->tid[i] == new_min_tid && iter->pos[i] < new_min_pos) {
[INFO] [stderr]   cargo:warning=      |                                     ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c: In function 'sam_cap_mapq':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:49:35: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=   49 |     for (i = y = 0, x = c->pos; i < c->n_cigar; ++i) {
[INFO] [stderr]   cargo:warning=      |                                   ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c: In function 'realn_check_tag':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:98:24: warning: comparison of integer expressions of different signedness: 'int32_t' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=   98 |     if (b->core.l_qseq != strlen((const char *) tg + 1)) {
[INFO] [stderr]   cargo:warning=      |                        ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c: In function 'sam_prob_realn':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:161:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  161 |     for (k = 0; k < c->n_cigar; ++k) {
[INFO] [stderr]   cargo:warning=      |                   ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:191:32: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int32_t' {aka 'int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  191 |         if (extend_baq && lref < c->l_qseq)
[INFO] [stderr]   cargo:warning=      |                                ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:224:46: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  224 |             for (k = 0, x = c->pos, y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr]   cargo:warning=      |                                              ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/realn.c:251:46: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  251 |             for (k = 0, x = c->pos, y = 0; k < c->n_cigar; ++k) {
[INFO] [stderr]   cargo:warning=      |                                              ^
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/hts_internal.h:31,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:34:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h: In function 'hts_str2int':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/textutils_internal.h:236:29: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  236 |     return (n && neg < 0) ? -((int64_t) (n - 1)) - 1 : n;
[INFO] [stderr]   cargo:warning=      |                             ^~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_push':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:153:14: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'long long unsigned int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  153 |     if ( beg > MAX_COOR_0 ) beg = MAX_COOR_0;
[INFO] [stderr]   cargo:warning=      |              ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:154:14: warning: comparison of integer expressions of different signedness: 'hts_pos_t' {aka 'long int'} and 'long long unsigned int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  154 |     if ( end > MAX_COOR_0 ) end = MAX_COOR_0;
[INFO] [stderr]   cargo:warning=      |              ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:184:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  184 |         if ( mreg != list->mreg ) {
[INFO] [stderr]   cargo:warning=      |                   ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_destroy':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:318:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  318 |             for (j=0; j<list->nreg; j++)
[INFO] [stderr]   cargo:warning=      |                        ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'reglist_build_index_':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:342:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  342 |             for (i=0; i<list->nreg; i++) ptr[i] = list->reg + i;
[INFO] [stderr]   cargo:warning=      |                        ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:347:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  347 |             for (i=0; i<list->nreg; i++) {
[INFO] [stderr]   cargo:warning=      |                        ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:358:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  358 |             for (i=0; i<list->nreg; i++) {
[INFO] [stderr]   cargo:warning=      |                        ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:376:18: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  376 |         if (midx <= iend) midx = iend;
[INFO] [stderr]   cargo:warning=      |                  ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:391:27: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  391 |             for (k=ibeg; k<=iend; k++)
[INFO] [stderr]   cargo:warning=      |                           ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_overlap':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:422:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  422 |         if ( ibeg >= list->nidx ) return 0;     // beg is too big
[INFO] [stderr]   cargo:warning=      |                   ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:429:23: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  429 |             if ( iend > list->nidx ) iend = list->nidx;
[INFO] [stderr]   cargo:warning=      |                       ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:430:27: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  430 |             for (i=ibeg; i<=iend; i++)
[INFO] [stderr]   cargo:warning=      |                           ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:432:19: warning: comparison of integer expressions of different signedness: 'uint32_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  432 |             if ( i>iend ) return 0;
[INFO] [stderr]   cargo:warning=      |                   ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:435:28: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  435 |         for (ireg=i-1; ireg<list->nreg; ireg++)
[INFO] [stderr]   cargo:warning=      |                            ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:441:19: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  441 |         if ( ireg >= list->nreg ) return 0;   // no match
[INFO] [stderr]   cargo:warning=      |                   ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_parse_bed':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:464:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  464 | int regidx_parse_bed(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr]   cargo:warning=      |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:464:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  464 | int regidx_parse_bed(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr]   cargo:warning=      |                                                                                                                       ~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_parse_tab':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:496:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  496 | int regidx_parse_tab(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr]   cargo:warning=      |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:496:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  496 | int regidx_parse_tab(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr]   cargo:warning=      |                                                                                                                       ~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regidx_parse_reg':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:570:42: warning: operand of '?:' changes signedness from 'hts_pos_t' {aka 'long int'} to 'long long unsigned int' due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  570 |         *end = se[0]=='-' ? MAX_COOR_0 : *beg;
[INFO] [stderr]   cargo:warning=      |                                          ^~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:543:110: warning: unused parameter 'payload' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  543 | int regidx_parse_reg(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr]   cargo:warning=      |                                                                                                        ~~~~~~^~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:543:125: warning: unused parameter 'usr' [-Wunused-parameter]
[INFO] [stderr]   cargo:warning=  543 | int regidx_parse_reg(const char *line, char **chr_beg, char **chr_end, hts_pos_t *beg, hts_pos_t *end, void *payload, void *usr)
[INFO] [stderr]   cargo:warning=      |                                                                                                                       ~~~~~~^~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regitr_overlap':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:626:24: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  626 |     for (i=itr->ireg; i<list->nreg; i++)
[INFO] [stderr]   cargo:warning=      |                        ^
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:632:12: warning: comparison of integer expressions of different signedness: 'int' and 'uint32_t' {aka 'unsigned int'} [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  632 |     if ( i >= list->nreg ) return 0;   // no match
[INFO] [stderr]   cargo:warning=      |            ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c: In function 'regitr_loop':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:658:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  658 |     if ( iseq >= regidx->nseq ) return 0;
[INFO] [stderr]   cargo:warning=      |               ^~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/regidx.c:663:19: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  663 |         if ( iseq >= regidx->nseq ) return 0; // no more sequences, done
[INFO] [stderr]   cargo:warning=      |                   ^~
[INFO] [stderr]   exit status: 1
[INFO] [stderr]   running: "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.c"
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   cargo:warning=In file included from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf.h:43,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/vcf_sweep.h:30,
[INFO] [stderr]   cargo:warning=                 from /opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.c:28:
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i32':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:245:34: warning: operand of '?:' changes signedness from 'int' to 'uint32_t' {aka 'unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  245 |     return v < 0x80000000U ? v : -((int32_t) (0xffffffffU - v)) - 1;
[INFO] [stderr]   cargo:warning=      |                                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h: In function 'le_to_i64':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/htslib/hts_endian.h:257:19: warning: operand of '?:' changes signedness from 'long int' to 'uint64_t' {aka 'long unsigned int'} due to unsignedness of other operand [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  257 |             ? v : -((int64_t) (0xffffffffffffffffULL - v)) - 1);
[INFO] [stderr]   cargo:warning=      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.c: In function 'bcf_sweep_fwd':
[INFO] [stderr]   cargo:warning=/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/vcf_sweep.c:169:53: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare]
[INFO] [stderr]   cargo:warning=  169 |         if ( !sw->nidx || pos - sw->idx[sw->nidx-1] > sw->block_size )
[INFO] [stderr]   cargo:warning=      |                                                     ^
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   error occurred: Command "cc" "-O0" "-ffunction-sections" "-fdata-sections" "-fPIC" "-g" "-fno-omit-frame-pointer" "-m64" "-I" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib" "-I" "/opt/rustwide/target/debug/build/libz-sys-f4181d2e2b66d7ff/out/include" "-Wall" "-Wextra" "-o" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.o" "-c" "/opt/rustwide/target/debug/build/hts-sys-9d188ffbb1f60fb6/out/htslib/sam.c" with args "cc" did not execute successfully (status code exit status: 1).
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b", kill_on_drop: false }`
[INFO] [stdout] f1ff7a7ef7bae95bc8181051afe1f7c9e3d230a10b6d56e563cacfd7566a2e5b
