[INFO] fetching crate rsabpoa 0.3.7...
[INFO] testing rsabpoa-0.3.7 against 1.100.0-beta.1 for beta-1.100-2
[INFO] extracting crate rsabpoa 0.3.7 into /workspace/builds/worker-6-tc2/source
[INFO] started tweaking crates.io crate rsabpoa 0.3.7
[INFO] finished tweaking crates.io crate rsabpoa 0.3.7
[INFO] tweaked toml for crates.io crate rsabpoa 0.3.7 written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate rsabpoa 0.3.7 on toolchain 1.100.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate rsabpoa 0.3.7 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e
[INFO] running `Command { std: "docker" "start" "6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
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[INFO] [stderr]    Compiling rsabpoa v0.3.7 (/opt/rustwide/workdir)
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[INFO] [stdout] warning: type `__off_t` should have an upper camel case name
[INFO] [stdout]   --> src/abpoa_sys.rs:83:10
[INFO] [stdout]    |
[INFO] [stdout] 83 | pub type __off_t = ::std::os::raw::c_long;
[INFO] [stdout]    |          ^^^^^^^ help: convert the identifier to upper camel case: `OffT`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(non_camel_case_types)]` (part of `#[warn(nonstandard_style)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: type `__off64_t` should have an upper camel case name
[INFO] [stdout]   --> src/abpoa_sys.rs:84:10
[INFO] [stdout]    |
[INFO] [stdout] 84 | pub type __off64_t = ::std::os::raw::c_long;
[INFO] [stdout]    |          ^^^^^^^^^ help: convert the identifier to upper camel case: `Off64T`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: type `__m128i` should have an upper camel case name
[INFO] [stdout]   --> src/abpoa_sys.rs:85:10
[INFO] [stdout]    |
[INFO] [stdout] 85 | pub type __m128i = [::std::os::raw::c_longlong; 2usize];
[INFO] [stdout]    |          ^^^^^^^ help: convert the identifier to upper camel case: `M128i`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: type `_IO_lock_t` should have an upper camel case name
[INFO] [stdout]    --> src/abpoa_sys.rs:102:10
[INFO] [stdout]     |
[INFO] [stdout] 102 | pub type _IO_lock_t = ::std::os::raw::c_void;
[INFO] [stdout]     |          ^^^^^^^^^^ help: convert the identifier to upper camel case: `IoLockT`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `abpoa_msa1`
[INFO] [stdout]  --> src/abpoa.rs:7:81
[INFO] [stdout]   |
[INFO] [stdout] 7 |         abpoa_generate_consensus, abpoa_generate_rc_msa, abpoa_init, abpoa_msa, abpoa_msa1,
[INFO] [stdout]   |                                                                                 ^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_read_ptr` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:107:9
[INFO] [stdout]     |
[INFO] [stdout] 107 |     pub _IO_read_ptr: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_ptr`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_read_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:108:9
[INFO] [stdout]     |
[INFO] [stdout] 108 |     pub _IO_read_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_read_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:109:9
[INFO] [stdout]     |
[INFO] [stdout] 109 |     pub _IO_read_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_read_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_write_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:110:9
[INFO] [stdout]     |
[INFO] [stdout] 110 |     pub _IO_write_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_write_ptr` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:111:9
[INFO] [stdout]     |
[INFO] [stdout] 111 |     pub _IO_write_ptr: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_ptr`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_write_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:112:9
[INFO] [stdout]     |
[INFO] [stdout] 112 |     pub _IO_write_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_write_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_buf_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:113:9
[INFO] [stdout]     |
[INFO] [stdout] 113 |     pub _IO_buf_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_buf_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_buf_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:114:9
[INFO] [stdout]     |
[INFO] [stdout] 114 |     pub _IO_buf_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_buf_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_save_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:115:9
[INFO] [stdout]     |
[INFO] [stdout] 115 |     pub _IO_save_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_save_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_backup_base` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:116:9
[INFO] [stdout]     |
[INFO] [stdout] 116 |     pub _IO_backup_base: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_backup_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: structure field `_IO_save_end` should have a snake case name
[INFO] [stdout]    --> src/abpoa_sys.rs:117:9
[INFO] [stdout]     |
[INFO] [stdout] 117 |     pub _IO_save_end: *mut ::std::os::raw::c_char,
[INFO] [stdout]     |         ^^^^^^^^^^^^ help: convert the identifier to snake case (notice the capitalization): `_io_save_end`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: suspicious definition of the runtime `free` symbol used by the standard library
[INFO] [stdout]   --> src/abpoa.rs:30:5
[INFO] [stdout]    |
[INFO] [stdout] 30 |     pub fn free(ptr: *mut u64);
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: expected `unsafe extern "C" fn(*mut c_void)` (for the current target)
[INFO] [stdout]            found    `unsafe extern "C" fn(*mut u64)`
[INFO] [stdout]    = help: either fix the signature or remove any attributes like `#[unsafe(no_mangle)]`, `#[unsafe(export_name = "free")]`, or `#[link_name = "free"]`
[INFO] [stdout]    = help: allow this lint if the signature is compatible
[INFO] [stdout]    = note: `#[warn(suspicious_runtime_symbol_definitions)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `abpoa_consensus_dna`, `abpoa_free_para`, and `msa_with_adaptive_fwd_rev`
[INFO] [stdout]   --> src/bin/abpoa_consensus.rs:17:13
[INFO] [stdout]    |
[INFO] [stdout] 17 |     abpoa::{abpoa_consensus_dna, abpoa_consensus_dna_core, msa_with_adaptive_fwd_rev, AbpoaParam},
[INFO] [stdout]    |             ^^^^^^^^^^^^^^^^^^^                            ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 18 |     abpoa_sys::{abpoa_free, abpoa_free_para, abpoa_init, abpoa_para_t, abpoa_t},
[INFO] [stdout]    |                             ^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "/opt/rustwide/target/debug/build/rsabpoa/c950f6489c45d47d/out/rustcefJf63/symbols.o" "<9 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib" "/opt/rustwide/target/debug/build/gskits/44fbe0b91264736d/out/libgskits-44fbe0b91264736d.rlib" "/opt/rustwide/target/debug/build/num_cpus/8055d227d862d7df/out/libnum_cpus-8055d227d862d7df.rlib" "/opt/rustwide/target/debug/build/uuid/4bc772232758ab87/out/libuuid-4bc772232758ab87.rlib" "/opt/rustwide/target/debug/build/sha1_smol/a320b1639232fa11/out/libsha1_smol-a320b1639232fa11.rlib" "/opt/rustwide/target/debug/build/chrono/d54b3e54ded00e3b/out/libchrono-d54b3e54ded00e3b.rlib" "/opt/rustwide/target/debug/build/iana-time-zone/98f2ac8a8c5a9959/out/libiana_time_zone-98f2ac8a8c5a9959.rlib" "/opt/rustwide/target/debug/build/indicatif/ca880ffc5752d29d/out/libindicatif-ca880ffc5752d29d.rlib" "/opt/rustwide/target/debug/build/portable-atomic/8a28229fd08da2da/out/libportable_atomic-8a28229fd08da2da.rlib" "/opt/rustwide/target/debug/build/number_prefix/6b994bedec76f9db/out/libnumber_prefix-6b994bedec76f9db.rlib" "/opt/rustwide/target/debug/build/console/29e8e6dc70ac81c3/out/libconsole-29e8e6dc70ac81c3.rlib" "/opt/rustwide/target/debug/build/unicode-width/0122813f2549e4e9/out/libunicode_width-0122813f2549e4e9.rlib" "/opt/rustwide/target/debug/build/once_cell/87ad594b4fdd0b3c/out/libonce_cell-87ad594b4fdd0b3c.rlib" "/opt/rustwide/target/debug/build/bio/b2b02671703e7bcd/out/libbio-b2b02671703e7bcd.rlib" "/opt/rustwide/target/debug/build/strum/e3cef8f7d45a2447/out/libstrum-e3cef8f7d45a2447.rlib" "/opt/rustwide/target/debug/build/csv/3932ef921b5eb57f/out/libcsv-3932ef921b5eb57f.rlib" "/opt/rustwide/target/debug/build/ryu/a7164637bc4900ee/out/libryu-a7164637bc4900ee.rlib" "/opt/rustwide/target/debug/build/itoa/ef40fa516293a9d3/out/libitoa-ef40fa516293a9d3.rlib" 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"/opt/rustwide/target/debug/build/icu_locid_transform/0b2d3b2c57ec9d6c/out/libicu_locid_transform-0b2d3b2c57ec9d6c.rlib" "/opt/rustwide/target/debug/build/icu_locid_transform_data/94513cffde0b2fcb/out/libicu_locid_transform_data-94513cffde0b2fcb.rlib" "/opt/rustwide/target/debug/build/icu_collections/f9de3bcd08c168de/out/libicu_collections-f9de3bcd08c168de.rlib" "/opt/rustwide/target/debug/build/icu_provider/f9e64d3107124c46/out/libicu_provider-f9e64d3107124c46.rlib" "/opt/rustwide/target/debug/build/icu_locid/164d0d7ed1fa6185/out/libicu_locid-164d0d7ed1fa6185.rlib" "/opt/rustwide/target/debug/build/litemap/79485f3bd9d9879d/out/liblitemap-79485f3bd9d9879d.rlib" "/opt/rustwide/target/debug/build/tinystr/242396eb40a34a6b/out/libtinystr-242396eb40a34a6b.rlib" "/opt/rustwide/target/debug/build/zerovec/a6e38456580c908a/out/libzerovec-a6e38456580c908a.rlib" "/opt/rustwide/target/debug/build/writeable/1e5dea0053e4c229/out/libwriteable-1e5dea0053e4c229.rlib" 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"<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lm" "-lz" "-lpthread" "-lbz2" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/opt/rustwide/target/debug/build/rsabpoa/c950f6489c45d47d/out/rustcefJf63/raw-dylibs" "-B<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/rsabpoa/397eb05a77ea25f5/out/abPOA-v1.5.3/lib" "-L" "/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out" "-L" "/opt/rustwide/target/debug/build/curl-sys/46a051db1d13cde5/out/build" "-L" "/opt/rustwide/target/debug/build/libz-sys/f5c2e1deefa0228d/out/lib" "-L" "/opt/rustwide/target/debug/build/openssl-sys/6bc6055f38469b00/out/openssl-build/install/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys/9a3b0dedbbac730b/out" "-L" "/usr/lib" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/build/rsabpoa/c950f6489c45d47d/out/abpoa_consensus" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: rust-lld: error: duplicate symbol: kvsprintf
[INFO] [stdout]           >>> defined at kstring.c:9 (src/kstring.c:9)
[INFO] [stdout]           >>>            kstring.o:(kvsprintf) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:143 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:143)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.kvsprintf+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: ksprintf
[INFO] [stdout]           >>> defined at kstring.c:28 (src/kstring.c:28)
[INFO] [stdout]           >>>            kstring.o:(ksprintf) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:178 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:178)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.ksprintf+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kstrtok
[INFO] [stdout]           >>> defined at kstring.c:38 (src/kstring.c:38)
[INFO] [stdout]           >>>            kstring.o:(kstrtok) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:188 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:188)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.kstrtok+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: ksplit_core
[INFO] [stdout]           >>> defined at kstring.c:66 (src/kstring.c:66)
[INFO] [stdout]           >>>            kstring.o:(ksplit_core) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:225 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:225)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.ksplit_core+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kgetline
[INFO] [stdout]           >>> defined at kstring.c:110 (src/kstring.c:110)
[INFO] [stdout]           >>>            kstring.o:(kgetline) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:271 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:271)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.kgetline+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kmemmem
[INFO] [stdout]           >>> defined at kstring.c:177 (src/kstring.c:177)
[INFO] [stdout]           >>>            kstring.o:(kmemmem) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:378 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:378)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.kmemmem+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kstrstr
[INFO] [stdout]           >>> defined at kstring.c:198 (src/kstring.c:198)
[INFO] [stdout]           >>>            kstring.o:(kstrstr) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:400 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:400)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.kstrstr+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           
[INFO] [stdout]           rust-lld: error: duplicate symbol: kstrnstr
[INFO] [stdout]           >>> defined at kstring.c:203 (src/kstring.c:203)
[INFO] [stdout]           >>>            kstring.o:(kstrnstr) in archive /opt/rustwide/target/debug/build/rsabpoa/c7daf10b06b8630d/out/librsabpoa-c7daf10b06b8630d.rlib
[INFO] [stdout]           >>> defined at kstring.c:405 (/opt/rustwide/target/debug/build/hts-sys/7f8d063580c29844/out/htslib/kstring.c:405)
[INFO] [stdout]           >>>            2729d8926a7683b4-kstring.o:(.text.kstrnstr+0x0) in archive /opt/rustwide/target/debug/build/hts-sys/68039585f0adc639/out/libhts_sys-68039585f0adc639.rlib
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `rsabpoa` (bin "abpoa_consensus") due to 1 previous error; 1 warning emitted
[INFO] running `Command { std: "docker" "inspect" "6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e", kill_on_drop: false }`
[INFO] [stdout] 6e5a7b7d97458ec3a8cfe0ab078173a2b9a203cf46a16694e274d1d78638f95e
