[INFO] cloning repository https://github.com/furlan-lab/mergebams
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/furlan-lab/mergebams" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffurlan-lab%2Fmergebams", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffurlan-lab%2Fmergebams'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] bfc788b6ab10a1a50defac97100f7037f3bef3e3
[INFO] testing furlan-lab/mergebams against 1.99.0-beta.8 for beta-1.100-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffurlan-lab%2Fmergebams" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/furlan-lab/mergebams
[INFO] finished tweaking git repo https://github.com/furlan-lab/mergebams
[INFO] tweaked toml for git repo https://github.com/furlan-lab/mergebams written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/furlan-lab/mergebams on toolchain 1.99.0-beta.8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/furlan-lab/mergebams already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/scfurl/differ`
[INFO] [stderr]      Locking 1 package to highest compatible version
[INFO] [stderr]       Adding differ v1.0.1 (https://github.com/scfurl/differ#71a0bff0)
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded serde_yaml v0.8.26
[INFO] [stderr]   Downloaded once_cell v1.16.0
[INFO] [stderr]   Downloaded thread-id v3.3.0
[INFO] [stderr]   Downloaded simple-log v1.6.0
[INFO] [stderr]   Downloaded log4rs v0.13.0
[INFO] [stderr]   Downloaded ordered-float v1.1.1
[INFO] [stderr]   Downloaded serde-value v0.6.0
[INFO] [stderr]   Downloaded scratch v1.0.2
[INFO] [stderr]   Downloaded is_debug v1.0.1
[INFO] [stderr]   Downloaded link-cplusplus v1.0.7
[INFO] [stderr]   Downloaded cxxbridge-flags v1.0.81
[INFO] [stderr]   Downloaded parking_lot_core v0.8.5
[INFO] [stderr]   Downloaded cxx-build v1.0.81
[INFO] [stderr]   Downloaded arc-swap v0.4.8
[INFO] [stderr]   Downloaded convert_case v0.5.0
[INFO] [stderr]   Downloaded yaml-rust v0.3.5
[INFO] [stderr]   Downloaded yaml-rust v0.4.5
[INFO] [stderr]   Downloaded cxxbridge-macro v1.0.81
[INFO] [stderr]   Downloaded miniz_oxide v0.5.4
[INFO] [stderr]   Downloaded bam v0.1.4
[INFO] [stderr]   Downloaded cc v1.0.76
[INFO] [stderr]   Downloaded flate2 v1.0.24
[INFO] [stderr]   Downloaded cxx v1.0.81
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd
[INFO] running `Command { std: "docker" "start" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.47
[INFO] [stderr]    Compiling unicode-ident v1.0.5
[INFO] [stderr]    Compiling quote v1.0.21
[INFO] [stderr]    Compiling syn v1.0.103
[INFO] [stderr]    Compiling serde_derive v1.0.147
[INFO] [stderr]    Compiling libc v0.2.137
[INFO] [stderr]    Compiling serde v1.0.147
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling parking_lot_core v0.8.5
[INFO] [stderr]    Compiling ryu v1.0.11
[INFO] [stderr]    Compiling miniz_oxide v0.5.4
[INFO] [stderr]    Compiling instant v0.1.12
[INFO] [stderr]    Compiling smallvec v1.10.0
[INFO] [stderr]    Compiling scopeguard v1.1.0
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling lock_api v0.4.9
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling indexmap v1.9.1
[INFO] [stderr]    Compiling serde_json v1.0.87
[INFO] [stderr]    Compiling linked-hash-map v0.5.6
[INFO] [stderr]    Compiling yaml-rust v0.4.5
[INFO] [stderr]    Compiling time v0.1.44
[INFO] [stderr]    Compiling flate2 v1.0.24
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling iana-time-zone v0.1.53
[INFO] [stderr]    Compiling itoa v1.0.4
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling parking_lot v0.11.2
[INFO] [stderr]    Compiling thread-id v3.3.0
[INFO] [stderr]    Compiling log-mdc v0.1.0
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling arc-swap v0.4.8
[INFO] [stderr]    Compiling ordered-float v1.1.1
[INFO] [stderr]    Compiling unicode-width v0.1.10
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling either v1.8.0
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling is_debug v1.0.1
[INFO] [stderr]    Compiling yaml-rust v0.3.5
[INFO] [stderr]    Compiling convert_case v0.5.0
[INFO] [stderr]    Compiling byteorder v1.4.3
[INFO] [stderr]    Compiling once_cell v1.16.0
[INFO] [stderr]    Compiling chrono v0.4.23
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling differ v1.0.1 (https://github.com/scfurl/differ#71a0bff0)
[INFO] [stderr]    Compiling bytes v1.2.1
[INFO] [stderr]    Compiling bam v0.1.4
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling serde_yaml v0.8.26
[INFO] [stderr]    Compiling serde-value v0.6.0
[INFO] [stderr]    Compiling bstr v0.2.17
[INFO] [stderr]    Compiling toml v0.5.9
[INFO] [stderr]    Compiling csv v1.1.6
[INFO] [stderr]    Compiling log4rs v0.13.0
[INFO] [stderr]    Compiling simple-log v1.6.0
[INFO] [stderr]    Compiling mergebams v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 37.98s
[INFO] running `Command { std: "docker" "inspect" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling mergebams v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.47s
[INFO] running `Command { std: "docker" "inspect" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.12s
[INFO] [stderr]      Running unittests src/mergebams.rs (/opt/rustwide/target/debug/deps/mergebams-17b9fefd4be6ab3a)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd", kill_on_drop: false }`
[INFO] [stdout] fc7d20f92c7beecef1fefa654989d8dba4e316b82259064412adf6a0d31e04dd