[INFO] cloning repository https://github.com/fg-labs/bwa-mem3-bench
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/fg-labs/bwa-mem3-bench" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fbwa-mem3-bench", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fbwa-mem3-bench'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8a7e0da236581c1d645b08cf16789edd61897ba3
[INFO] testing fg-labs/bwa-mem3-bench against 1.100.0-beta.1 for beta-1.100-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ffg-labs%2Fbwa-mem3-bench" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-0-tc2/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/fg-labs/bwa-mem3-bench
[INFO] finished tweaking git repo https://github.com/fg-labs/bwa-mem3-bench
[INFO] tweaked toml for git repo https://github.com/fg-labs/bwa-mem3-bench written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/fg-labs/bwa-mem3-bench on toolchain 1.100.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/fg-labs/bwa-mem3-bench already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3111399a4047eeb3a02b7a90e478d715f38a8c6669b5c4b49d30a17385265909" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841
[INFO] running `Command { std: "docker" "start" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling lexical-util v1.0.7
[INFO] [stderr]    Compiling simd-adler32 v0.3.9
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling hashbrown v0.17.0
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling bstr v1.12.1
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling clap_builder v4.6.0
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling noodles-core v0.15.0
[INFO] [stderr]    Compiling lexical-write-float v1.0.6
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]    Compiling lexical-core v1.0.6
[INFO] [stderr]    Compiling noodles-bgzf v0.33.0
[INFO] [stderr]    Compiling noodles-csi v0.39.0
[INFO] [stderr]    Compiling noodles-sam v0.65.0
[INFO] [stderr]    Compiling clap_derive v4.6.1
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling noodles-bam v0.68.0
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling clap v4.6.1
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling compare-bams v0.1.0 (/opt/rustwide/workdir/tools/compare-bams)
[INFO] [stderr] warning: unused dependency `thiserror`
[INFO] [stderr]   --> tools/compare-bams/Cargo.toml:28:1
[INFO] [stderr]    |
[INFO] [stderr] 28 | thiserror = "1"
[INFO] [stderr]    | ^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::unused_dependencies` is set to `warn` by default
[INFO] [stderr] help: consider removing the dependency on `thiserror`
[INFO] [stderr] warning: `compare-bams` (manifest) generated 1 warning
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 20.66s
[INFO] running `Command { std: "docker" "inspect" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling bitflags v2.11.1
[INFO] [stderr]    Compiling libc v0.2.185
[INFO] [stderr]    Compiling fastrand v2.4.1
[INFO] [stderr]    Compiling noodles-sam v0.65.0
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]    Compiling tempfile v3.27.0
[INFO] [stderr]    Compiling noodles-bam v0.68.0
[INFO] [stderr]    Compiling compare-bams v0.1.0 (/opt/rustwide/workdir/tools/compare-bams)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 12.23s
[INFO] running `Command { std: "docker" "inspect" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.10s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/build/compare-bams/89ba5a09031c2716/out/compare_bams-89ba5a09031c2716)
[INFO] [stdout] 
[INFO] [stdout] running 62 tests
[INFO] [stdout] test classify::tests::identical_records_are_concordant ... ok
[INFO] [stdout] test classify::tests::tag_order_is_not_a_difference ... ok
[INFO] [stdout] test classify::tests::tag_value_difference_is_reported_when_placement_matches ... ok
[INFO] [stdout] test compare::tests::a_real_difference_in_a_duplicate_key_bucket_still_counts ... ok
[INFO] [stdout] test classify::tests::mapping_disagreement_short_circuits_to_a_single_finding ... ok
[INFO] [stdout] test compare::tests::a_tag_only_on_a_supplementary_is_still_censused ... ok
[INFO] [stdout] test classify::tests::one_sided_tags_are_presence_differences_not_value_differences ... ok
[INFO] [stdout] test classify::tests::integer_encoding_width_is_not_a_difference ... ok
[INFO] [stdout] test compare::tests::extra_query_supplementary_is_counted_not_fatal ... ok
[INFO] [stdout] test compare::tests::identical_primaries_no_supps_are_concordant ... ok
[INFO] [stdout] test compare::tests::matched_supplementaries_differing_in_mapq_are_content_diffs ... ok
[INFO] [stdout] test compare::tests::moved_supplementary_same_count_but_unmatched_by_position ... ok
[INFO] [stdout] test compare::tests::an_extra_query_secondary_is_counted_unmatched ... ok
[INFO] [stdout] test compare::tests::a_secondary_content_difference_is_reported_on_the_secondary_axis ... ok
[INFO] [stdout] test classify::tests::ignored_tags_are_compared_neither_by_value_nor_by_presence ... ok
[INFO] [stdout] test compare::tests::non_primary_content_diffs_stay_out_of_the_primary_score ... ok
[INFO] [stdout] test compare::tests::duplicate_key_non_primaries_in_reversed_order_are_not_content_diffs ... ok
[INFO] [stdout] test classify::tests::mapq_tolerance_is_respected ... ok
[INFO] [stdout] test classify::tests::core_and_tag_differences_are_both_reported ... ok
[INFO] [stdout] test compare::tests::non_primaries_on_different_ends_at_one_locus_no_longer_cancel ... ok
[INFO] [stdout] test compare::tests::non_primary_content_diffs_are_broken_down_by_class ... ok
[INFO] [stdout] test guard::tests::a_declared_tag_set_passes ... ok
[INFO] [stdout] test guard::tests::absent_ok_suppresses_the_dead_entry_finding ... ok
[INFO] [stdout] test classify::tests::both_unmapped_still_compares_tags ... ok
[INFO] [stdout] test classify::tests::string_and_hex_with_the_same_bytes_are_a_difference ... ok
[INFO] [stdout] test compare::tests::supplementaries_at_one_locus_on_different_ends_do_not_cross_pair ... ok
[INFO] [stdout] test guard::tests::all_violations_are_reported_together ... ok
[INFO] [stdout] test compare::tests::primary_position_difference_is_discordant ... ok
[INFO] [stdout] test guard::tests::an_absent_ok_entry_that_is_not_ignored_is_itself_a_violation ... ok
[INFO] [stdout] test classify::tests::character_and_integer_with_the_same_code_point_are_a_difference ... ok
[INFO] [stdout] test guard::tests::an_empty_allowlist_disables_only_the_unexpected_tag_check ... ok
[INFO] [stdout] test placement::tests::confident_read_unmapped_or_absent_on_the_other_side_is_relocated ... ok
[INFO] [stdout] test guard::tests::an_expected_tag_that_never_appears_is_not_a_violation ... ok
[INFO] [stdout] test placement::tests::different_contig_or_strand_is_relocated ... ok
[INFO] [stdout] test placement::tests::distance_threshold_is_inclusive ... ok
[INFO] [stdout] test guard::tests::an_ignored_tag_does_not_also_need_to_be_expected ... ok
[INFO] [stdout] test placement::tests::report_counts_and_percentage ... ok
[INFO] [stdout] test guard::tests::an_unlisted_tag_is_reported_with_its_presence_counts ... ok
[INFO] [stdout] test placement::tests::unclipped_five_prime_forward_subtracts_leading_clip ... ok
[INFO] [stdout] test guard::tests::one_sided_presence_keeps_an_ignore_entry_alive ... ok
[INFO] [stdout] test placement::tests::unclipped_five_prime_reverse_is_the_rightmost_base_plus_trailing_clip ... ok
[INFO] [stdout] test placement::tests::a_soft_clip_difference_at_the_same_locus_is_not_a_move ... ok
[INFO] [stdout] test placement::tests::one_sided_confidence_is_attributed_to_that_side ... ok
[INFO] [stdout] test report::tests::by_class_buckets_overlap_across_a_single_read ... ok
[INFO] [stdout] test report::tests::a_read_with_no_differences_is_concordant ... ok
[INFO] [stdout] test placement::tests::neither_side_confident_is_not_counted ... ok
[INFO] [stdout] test report::tests::ignored_and_scored_tags_coexist_on_one_read ... ok
[INFO] [stdout] test report::tests::presence_is_counted_for_tags_that_never_diverge ... ok
[INFO] [stdout] test template_reader::tests::groups_contiguous_records_by_qname ... ok
[INFO] [stdout] test template_reader::tests::record_without_qname_is_an_error ... ok
[INFO] [stdout] test template_reader::tests::template_order_divergence_is_an_error ... ok
[INFO] [stdout] test template_reader::tests::unequal_template_counts_is_an_error ... ok
[INFO] [stdout] test report::tests::concordance_pct_counts_only_fully_matching_reads ... ok
[INFO] [stdout] test report::tests::multiple_tag_diffs_on_one_read_count_once_as_a_class ... ok
[INFO] [stdout] test placement::tests::no_confident_reads_serializes_the_percentage_as_null ... ok
[INFO] [stdout] test report::tests::ignored_tag_diffs_are_visible_but_never_scored ... ok
[INFO] [stdout] test report::tests::mark_ignored_flags_a_tag_that_never_diverged ... ok
[INFO] [stdout] test report::tests::one_sided_records_contribute_one_sided_presence ... ok
[INFO] [stdout] test report::tests::presence_and_value_differences_are_tallied_separately ... ok
[INFO] [stdout] test compare::tests::a_secondary_record_is_tallied_not_dropped ... ok
[INFO] [stdout] test template_reader::tests::templates_pair_up_matching_names_with_uneven_record_counts ... ok
[INFO] [stdout] test guard::tests::a_dead_ignore_entry_is_reported ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 62 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/build/compare-bams/8b761170bfacdd4d/out/compare_bams-8b761170bfacdd4d)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/bin/tag-census.rs (/opt/rustwide/target/debug/build/compare-bams/22b5f5d2e47f1a8a/out/tag_census-22b5f5d2e47f1a8a)
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test tests::identical_tags_produce_no_divergence ... ok
[INFO] [stdout] test tests::core_discordant_reads_are_bucketed_separately ... ok
[INFO] [stdout] test tests::a_one_sided_primary_still_contributes_its_tags ... ok
[INFO] [stdout] test tests::value_difference_is_recorded_against_a_core_concordant_read ... ok
[INFO] [stdout] test tests::presence_difference_is_separate_from_value_difference ... ok
[INFO] [stdout] test tests::tag_order_is_not_a_difference ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/classify_tests.rs (/opt/rustwide/target/debug/build/compare-bams/cc50bba21073b1ed/out/classify_tests-cc50bba21073b1ed)
[INFO] [stdout] 
[INFO] [stdout] running 11 tests
[INFO] [stdout] test both_unmapped_records_still_compare_flags ... ok
[INFO] [stdout] test different_positions_are_pos_diff ... ok
[INFO] [stdout] test proper_pair_bit_difference_is_flag_diff ... ok
[INFO] [stdout] test identical_records_are_concordant ... ok
[INFO] [stdout] test mapq_within_tolerance_is_concordant ... ok
[INFO] [stdout] test mate_unmapped_bit_difference_is_flag_diff ... ok
[INFO] [stdout] test only_query_mapped_is_mapped_only_query ... ok
[INFO] [stdout] test different_chromosomes_is_pos_diff ... ok
[INFO] [stdout] test mapq_outside_tolerance_is_mapq_diff ... ok
[INFO] [stdout] test different_flag_bits_is_flag_diff ... ok
[INFO] [stdout] test only_baseline_mapped_is_mapped_only_baseline ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 11 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/cli_smoke.rs (/opt/rustwide/target/debug/build/compare-bams/a7b8b04614cfac28/out/cli_smoke-a7b8b04614cfac28)
[INFO] [stdout] 
[INFO] [stdout] running 10 tests
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (n/a)
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (n/a)
[INFO] [stdout] test cli_accepts_optional_flags ... ok
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stdout] test no_tag_guard_suppresses_the_failure_but_not_the_report ... ok
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (compare-bams: total=n/a)
[INFO] [stdout] test an_unexpected_tag_exits_3_and_still_writes_the_report ... ok
[INFO] [stderr] 1, concordant=1compare-bams: tag-guard: , concordance=absent-ok entry "ZZ" is not on the ignore list. Only ignore_tags entries are audited for absence, so this entry is never consulted and excuses nothing. Drop it, or add "ZZ" to ignore_tags if it was meant to be skipped.
[INFO] [stderr] compare-bams: tag-guard: 1001. violation(s); report written to 0000%
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (n/a/tmp/.tmpQvhoRr/report.json)
[INFO] [stderr] 
[INFO] [stderr] compare-bams: tag-guard: unexpected tag "ZZ": present on 1 query and 1 baseline records, but listed in neither expect_tags nor ignore_tags. It is being compared strictly. Add it to expect_tags if that is correct, or to ignore_tags if the two sides are not comparable on it.
[INFO] [stderr] compare-bams: tag-guard: 1 violation(s); report written to /tmp/.tmpdAGgo5/report.json
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (n/a)
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stderr] compare-bams: placement: confident=1, relocated=0 (0.0000%)
[INFO] [stdout] test omitting_both_expect_tag_and_no_tag_guard_is_a_usage_error ... ok
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stdout] test a_dead_ignore_entry_exits_3 ... ok
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (n/a)
[INFO] [stdout] test placement_thresholds_are_wired_through_the_cli ... ok
[INFO] [stderr] compare-bams: tag-guard: ignore_tags entry "MQ" matched no record on either side (0 of 1 primaries). A tag nobody emits cannot be suppressed, so this entry does nothing. Either the aligner stopped emitting it, or the entry is dead config.
[INFO] [stderr] compare-bams: tag-guard: 1 violation(s); report written to /tmp/.tmp3lmhpz/report.json
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (n/a)
[INFO] [stderr] compare-bams: total=1, concordant=1, concordance=100.0000%
[INFO] [stderr] compare-bams: placement: confident=0, relocated=0 (n/a)
[INFO] [stdout] test cli_produces_json_report ... ok
[INFO] [stdout] test a_redundant_absent_ok_entry_exits_3 ... ok
[INFO] [stdout] test a_live_ignore_entry_that_never_diverges_is_still_flagged_ignored ... ok
[INFO] [stdout] test a_malformed_tag_name_is_a_usage_error ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/compare_tests.rs (/opt/rustwide/target/debug/build/compare-bams/1b5d84904db0793e/out/compare_tests-1b5d84904db0793e)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test pos_diff_counts_one_discordance ... ok
[INFO] [stderr]      Running tests/template_reader_tests.rs (/opt/rustwide/target/debug/build/compare-bams/5d13f29f74c61e6b/out/template_reader_tests-5d13f29f74c61e6b)
[INFO] [stdout] test identical_streams_report_100_percent ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 5 tests
[INFO] [stdout] test pairs_templates_in_order ... ok
[INFO] [stdout] test extra_supplementary_within_template_is_tolerated ... ok
[INFO] [stdout] test unequal_template_counts_error ... ok
[INFO] [stdout] test unsorted_bams_without_so_tag_are_accepted ... ok
[INFO] [stderr]    Doc-tests compare_bams
[INFO] [stdout] test diverging_template_order_errors ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841", kill_on_drop: false }`
[INFO] [stdout] 199cf4a583bf0ba98ab7d22fb7785435dc665e0b22d7e4dace21cf45dffea841