[INFO] cloning repository https://github.com/HadiKhan-dev/li_stephens_py_hkhan [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/HadiKhan-dev/li_stephens_py_hkhan" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHadiKhan-dev%2Fli_stephens_py_hkhan", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHadiKhan-dev%2Fli_stephens_py_hkhan'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] ffb5c9dcd42dda06baf4a228c5dc028b0ef4fd09 [INFO] checking HadiKhan-dev/li_stephens_py_hkhan against master#385fa9d845dd326c6bbfd58c22244215e431948a for absurd-question-mark-desugar [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHadiKhan-dev%2Fli_stephens_py_hkhan" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan on toolchain 385fa9d845dd326c6bbfd58c22244215e431948a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan [INFO] finished tweaking git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan [INFO] tweaked toml for git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 31 packages [INFO] [stderr] Adding bitflags v1.3.2 (latest: v2.5.0) [INFO] [stderr] Adding cfg-if v0.1.10 (latest: v1.0.0) [INFO] [stderr] Adding cfg-if v1.0.0 [INFO] [stderr] Adding indoc v0.3.6 (latest: v2.0.5) [INFO] [stderr] Adding indoc-impl v0.3.6 (latest: v0.3.7) [INFO] [stderr] Adding instant v0.1.12 [INFO] [stderr] Adding li_stephens_py_hkhan v0.1.1 (/workspace/builds/worker-1-tc1/source) [INFO] [stderr] Adding libc v0.2.153 [INFO] [stderr] Adding lock_api v0.4.11 [INFO] [stderr] Adding numpy v0.15.1 (latest: v0.21.0) [INFO] [stderr] Adding once_cell v1.19.0 [INFO] [stderr] Adding parking_lot v0.11.2 (latest: v0.12.1) [INFO] [stderr] Adding parking_lot_core v0.8.6 (latest: v0.9.9) [INFO] [stderr] Adding paste v0.1.18 (latest: v1.0.14) [INFO] [stderr] Adding paste-impl v0.1.18 [INFO] [stderr] Adding proc-macro-hack v0.5.20+deprecated [INFO] [stderr] Adding proc-macro2 v1.0.79 [INFO] [stderr] Adding pyo3 v0.15.2 (latest: v0.21.1) [INFO] [stderr] Adding pyo3-build-config v0.15.2 (latest: v0.21.1) [INFO] [stderr] Adding pyo3-macros v0.15.2 (latest: v0.21.1) [INFO] [stderr] Adding pyo3-macros-backend v0.15.2 (latest: v0.21.1) [INFO] [stderr] Adding quote v1.0.35 [INFO] [stderr] Adding redox_syscall v0.2.16 (latest: v0.5.1) [INFO] [stderr] Adding scopeguard v1.2.0 [INFO] [stderr] Adding smallvec v1.13.2 [INFO] [stderr] Adding syn v1.0.109 (latest: v2.0.58) [INFO] [stderr] Adding unicode-ident v1.0.12 [INFO] [stderr] Adding unindent v0.1.11 (latest: v0.2.3) [INFO] [stderr] Adding winapi v0.3.9 [INFO] [stderr] Adding winapi-i686-pc-windows-gnu v0.4.0 [INFO] [stderr] Adding winapi-x86_64-pc-windows-gnu v0.4.0 [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded num-complex v0.4.2 [INFO] [stderr] Downloaded ndarray v0.15.4 [INFO] [stderr] Downloaded numpy v0.15.1 [INFO] [stderr] Downloaded pyo3-build-config v0.15.2 [INFO] [stderr] Downloaded pyo3 v0.15.2 [INFO] [stderr] Downloaded pyo3-macros-backend v0.15.2 [INFO] [stderr] Downloaded pyo3-macros v0.15.2 [INFO] [stderr] Downloaded li-stephens v0.1.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2f680c3e345f8bd280549de31c8d66b5644216ef7103c2788a422bd131f07452 [INFO] running `Command { std: "docker" "start" "-a" "2f680c3e345f8bd280549de31c8d66b5644216ef7103c2788a422bd131f07452", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2f680c3e345f8bd280549de31c8d66b5644216ef7103c2788a422bd131f07452", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2f680c3e345f8bd280549de31c8d66b5644216ef7103c2788a422bd131f07452", kill_on_drop: false }` [INFO] [stdout] 2f680c3e345f8bd280549de31c8d66b5644216ef7103c2788a422bd131f07452 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 522df2de296b42d0089d382acd70ba729a7cf59c98bb4d4676792f44cce1585a [INFO] running `Command { std: "docker" "start" "-a" "522df2de296b42d0089d382acd70ba729a7cf59c98bb4d4676792f44cce1585a", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling proc-macro2 v1.0.79 [INFO] [stderr] Compiling proc-macro-hack v0.5.20+deprecated [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling pyo3-build-config v0.15.2 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling libc v0.2.153 [INFO] [stderr] Compiling parking_lot_core v0.8.6 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling lock_api v0.4.11 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Checking instant v0.1.12 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling unindent v0.1.11 [INFO] [stderr] Checking scopeguard v1.2.0 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Checking matrixmultiply v0.3.2 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling quote v1.0.35 [INFO] [stderr] Checking parking_lot v0.11.2 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Checking num-complex v0.4.2 [INFO] [stderr] Compiling pyo3 v0.15.2 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking ndarray v0.15.4 [INFO] [stderr] Compiling pyo3-macros-backend v0.15.2 [INFO] [stderr] Checking li-stephens v0.1.0 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Checking indoc v0.3.6 [INFO] [stderr] Compiling pyo3-macros v0.15.2 [INFO] [stderr] Checking numpy v0.15.1 [INFO] [stderr] Checking li_stephens_py_hkhan v0.1.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `ndarray` [INFO] [stdout] --> src/lib.rs:1:5 [INFO] [stdout] | [INFO] [stdout] 1 | use ndarray; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `IntoPyArray`, `PyArray1`, `PyArray2`, `PyArrayDyn`, `PyReadonlyArrayDyn` [INFO] [stdout] --> src/lib.rs:2:13 [INFO] [stdout] | [INFO] [stdout] 2 | use numpy::{IntoPyArray, PyArray1, PyArray2, PyArrayDyn, PyReadonlyArrayDyn}; [INFO] [stdout] | ^^^^^^^^^^^ ^^^^^^^^ ^^^^^^^^ ^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the item `li_stephens` is imported redundantly [INFO] [stdout] --> src/lib.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use li_stephens; [INFO] [stdout] | ^^^^^^^^^^^ the item `li_stephens` is already defined by prelude [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/lib.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ndarray` [INFO] [stdout] --> src/lib.rs:1:5 [INFO] [stdout] | [INFO] [stdout] 1 | use ndarray; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `IntoPyArray`, `PyArray1`, `PyArray2`, `PyArrayDyn`, `PyReadonlyArrayDyn` [INFO] [stdout] --> src/lib.rs:2:13 [INFO] [stdout] | [INFO] [stdout] 2 | use numpy::{IntoPyArray, PyArray1, PyArray2, PyArrayDyn, PyReadonlyArrayDyn}; [INFO] [stdout] | ^^^^^^^^^^^ ^^^^^^^^ ^^^^^^^^ ^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the item `li_stephens` is imported redundantly [INFO] [stdout] --> src/lib.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use li_stephens; [INFO] [stdout] | ^^^^^^^^^^^ the item `li_stephens` is already defined by prelude [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/lib.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `py` [INFO] [stdout] --> src/lib.rs:12:31 [INFO] [stdout] | [INFO] [stdout] 12 | fn li_stephens_probs<'py>(py: Python<'py>,haplotypes: Vec, test_haplotype: String, mutation_prob: f64, [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_py` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `py` [INFO] [stdout] --> src/lib.rs:12:31 [INFO] [stdout] | [INFO] [stdout] 12 | fn li_stephens_probs<'py>(py: Python<'py>,haplotypes: Vec, test_haplotype: String, mutation_prob: f64, [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_py` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 28.03s [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "522df2de296b42d0089d382acd70ba729a7cf59c98bb4d4676792f44cce1585a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "522df2de296b42d0089d382acd70ba729a7cf59c98bb4d4676792f44cce1585a", kill_on_drop: false }` [INFO] [stdout] 522df2de296b42d0089d382acd70ba729a7cf59c98bb4d4676792f44cce1585a [INFO] checking HadiKhan-dev/li_stephens_py_hkhan against try#645bb72776a6a56a1a8f52631a44bd082b2ba509 for absurd-question-mark-desugar [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHadiKhan-dev%2Fli_stephens_py_hkhan" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan on toolchain 645bb72776a6a56a1a8f52631a44bd082b2ba509 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan [INFO] finished tweaking git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan [INFO] tweaked toml for git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan written to /workspace/builds/worker-1-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/HadiKhan-dev/li_stephens_py_hkhan already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a23e27e2b3e975da36351aef2915b42770a4e686710ea88a256db719d623d467 [INFO] running `Command { std: "docker" "start" "-a" "a23e27e2b3e975da36351aef2915b42770a4e686710ea88a256db719d623d467", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a23e27e2b3e975da36351aef2915b42770a4e686710ea88a256db719d623d467", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a23e27e2b3e975da36351aef2915b42770a4e686710ea88a256db719d623d467", kill_on_drop: false }` [INFO] [stdout] a23e27e2b3e975da36351aef2915b42770a4e686710ea88a256db719d623d467 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4720b1f4af742ac516acd69dd44d70cc5b062e0a20c3469e194e6c4d4ef12237 [INFO] running `Command { std: "docker" "start" "-a" "4720b1f4af742ac516acd69dd44d70cc5b062e0a20c3469e194e6c4d4ef12237", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling proc-macro2 v1.0.79 [INFO] [stderr] Compiling pyo3-build-config v0.15.2 [INFO] [stderr] Compiling proc-macro-hack v0.5.20+deprecated [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling libc v0.2.153 [INFO] [stderr] Compiling parking_lot_core v0.8.6 [INFO] [stderr] Checking instant v0.1.12 [INFO] [stderr] Checking scopeguard v1.2.0 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling unindent v0.1.11 [INFO] [stderr] Checking matrixmultiply v0.3.2 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling lock_api v0.4.11 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling quote v1.0.35 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Checking parking_lot v0.11.2 [INFO] [stderr] Compiling pyo3 v0.15.2 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking num-complex v0.4.2 [INFO] [stderr] Checking ndarray v0.15.4 [INFO] [stderr] Compiling pyo3-macros-backend v0.15.2 [INFO] [stderr] Compiling indoc-impl v0.3.6 [INFO] [stderr] Checking li-stephens v0.1.0 [INFO] [stderr] Checking indoc v0.3.6 [INFO] [stderr] Compiling pyo3-macros v0.15.2 [INFO] [stderr] Checking numpy v0.15.1 [INFO] [stderr] Checking li_stephens_py_hkhan v0.1.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `ndarray` [INFO] [stdout] --> src/lib.rs:1:5 [INFO] [stdout] | [INFO] [stdout] 1 | use ndarray; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `IntoPyArray`, `PyArray1`, `PyArray2`, `PyArrayDyn`, `PyReadonlyArrayDyn` [INFO] [stdout] --> src/lib.rs:2:13 [INFO] [stdout] | [INFO] [stdout] 2 | use numpy::{IntoPyArray, PyArray1, PyArray2, PyArrayDyn, PyReadonlyArrayDyn}; [INFO] [stdout] | ^^^^^^^^^^^ ^^^^^^^^ ^^^^^^^^ ^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the item `li_stephens` is imported redundantly [INFO] [stdout] --> src/lib.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use li_stephens; [INFO] [stdout] | ^^^^^^^^^^^ the item `li_stephens` is already defined by prelude [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/lib.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ndarray` [INFO] [stdout] --> src/lib.rs:1:5 [INFO] [stdout] | [INFO] [stdout] 1 | use ndarray; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `IntoPyArray`, `PyArray1`, `PyArray2`, `PyArrayDyn`, `PyReadonlyArrayDyn` [INFO] [stdout] --> src/lib.rs:2:13 [INFO] [stdout] | [INFO] [stdout] 2 | use numpy::{IntoPyArray, PyArray1, PyArray2, PyArrayDyn, PyReadonlyArrayDyn}; [INFO] [stdout] | ^^^^^^^^^^^ ^^^^^^^^ ^^^^^^^^ ^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: the item `li_stephens` is imported redundantly [INFO] [stdout] --> src/lib.rs:4:5 [INFO] [stdout] | [INFO] [stdout] 4 | use li_stephens; [INFO] [stdout] | ^^^^^^^^^^^ the item `li_stephens` is already defined by prelude [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/lib.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `py` [INFO] [stdout] --> src/lib.rs:12:31 [INFO] [stdout] | [INFO] [stdout] 12 | fn li_stephens_probs<'py>(py: Python<'py>,haplotypes: Vec, test_haplotype: String, mutation_prob: f64, [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_py` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `py` [INFO] [stdout] --> src/lib.rs:12:31 [INFO] [stdout] | [INFO] [stdout] 12 | fn li_stephens_probs<'py>(py: Python<'py>,haplotypes: Vec, test_haplotype: String, mutation_prob: f64, [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_py` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 25.05s [INFO] running `Command { std: "docker" "inspect" "4720b1f4af742ac516acd69dd44d70cc5b062e0a20c3469e194e6c4d4ef12237", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4720b1f4af742ac516acd69dd44d70cc5b062e0a20c3469e194e6c4d4ef12237", kill_on_drop: false }` [INFO] [stdout] 4720b1f4af742ac516acd69dd44d70cc5b062e0a20c3469e194e6c4d4ef12237