[INFO] cloning repository https://github.com/DLBPointon/FastaManipulator [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/DLBPointon/FastaManipulator" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 295c0f61440efc3490b3ae1012cae80cbcde31e8 [INFO] checking DLBPointon/FastaManipulator against master#385fa9d845dd326c6bbfd58c22244215e431948a for absurd-question-mark-desugar [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/DLBPointon/FastaManipulator on toolchain 385fa9d845dd326c6bbfd58c22244215e431948a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/DLBPointon/FastaManipulator [INFO] finished tweaking git repo https://github.com/DLBPointon/FastaManipulator [INFO] tweaked toml for git repo https://github.com/DLBPointon/FastaManipulator written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/DLBPointon/FastaManipulator already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-csi v0.24.0 [INFO] [stderr] Downloaded noodles v0.52.0 [INFO] [stderr] Downloaded noodles-core v0.12.0 [INFO] [stderr] Downloaded noodles-fasta v0.29.0 [INFO] [stderr] Downloaded noodles-bgzf v0.24.0 [INFO] [stderr] Downloaded clap v4.4.4 [INFO] [stderr] Downloaded noodles-bam v0.46.0 [INFO] [stderr] Downloaded clap_builder v4.4.4 [INFO] [stderr] Downloaded noodles-cram v0.43.0 [INFO] [stderr] Downloaded noodles-sam v0.43.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 45cb1e42905c48fa45833241b554ffa5deccfdcd6c7c7f473efe8843d678b6ce [INFO] running `Command { std: "docker" "start" "-a" "45cb1e42905c48fa45833241b554ffa5deccfdcd6c7c7f473efe8843d678b6ce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "45cb1e42905c48fa45833241b554ffa5deccfdcd6c7c7f473efe8843d678b6ce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "45cb1e42905c48fa45833241b554ffa5deccfdcd6c7c7f473efe8843d678b6ce", kill_on_drop: false }` [INFO] [stdout] 45cb1e42905c48fa45833241b554ffa5deccfdcd6c7c7f473efe8843d678b6ce [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+385fa9d845dd326c6bbfd58c22244215e431948a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fe53e45de859aa11de348db2f898f1dc7c3994476131103113975ece6b86f50e [INFO] running `Command { std: "docker" "start" "-a" "fe53e45de859aa11de348db2f898f1dc7c3994476131103113975ece6b86f50e", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.148 [INFO] [stderr] Compiling crossbeam-utils v0.8.16 [INFO] [stderr] Compiling pkg-config v0.3.27 [INFO] [stderr] Checking memchr v2.6.3 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling proc-macro2 v1.0.67 [INFO] [stderr] Checking bitflags v2.4.0 [INFO] [stderr] Checking hashbrown v0.14.0 [INFO] [stderr] Checking lexical-util v0.8.5 [INFO] [stderr] Checking noodles-core v0.12.0 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Compiling serde v1.0.188 [INFO] [stderr] Compiling rustix v0.38.15 [INFO] [stderr] Checking miniz_oxide v0.7.1 [INFO] [stderr] Checking anstyle-parse v0.2.1 [INFO] [stderr] Checking colorchoice v1.0.0 [INFO] [stderr] Checking anstyle v1.0.3 [INFO] [stderr] Checking anstyle-query v1.0.0 [INFO] [stderr] Checking linux-raw-sys v0.4.8 [INFO] [stderr] Checking md-5 v0.10.6 [INFO] [stderr] Checking strsim v0.10.0 [INFO] [stderr] Checking regex-syntax v0.7.5 [INFO] [stderr] Checking anstream v0.5.0 [INFO] [stderr] Checking itoa v1.0.9 [INFO] [stderr] Checking clap_lex v0.5.1 [INFO] [stderr] Checking lexical-write-integer v0.8.5 [INFO] [stderr] Checking lexical-parse-integer v0.8.6 [INFO] [stderr] Checking ryu v1.0.15 [INFO] [stderr] Checking aho-corasick v1.1.1 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking indexmap v2.0.0 [INFO] [stderr] Checking unsafe-libyaml v0.2.9 [INFO] [stderr] Checking clap_builder v4.4.4 [INFO] [stderr] Checking lexical-parse-float v0.8.5 [INFO] [stderr] Checking lexical-write-float v0.8.5 [INFO] [stderr] Checking flate2 v1.0.27 [INFO] [stderr] Compiling quote v1.0.33 [INFO] [stderr] Checking crossbeam-channel v0.5.8 [INFO] [stderr] Compiling syn v2.0.37 [INFO] [stderr] Checking lexical-core v0.8.5 [INFO] [stderr] Compiling cc v1.0.83 [INFO] [stderr] Checking noodles-bgzf v0.24.0 [INFO] [stderr] Checking is-terminal v0.4.9 [INFO] [stderr] Checking colored v2.0.4 [INFO] [stderr] Checking noodles-csi v0.24.0 [INFO] [stderr] Checking noodles-fasta v0.29.0 [INFO] [stderr] Checking noodles-sam v0.43.0 [INFO] [stderr] Checking regex-automata v0.3.8 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Checking clap v4.4.4 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Compiling serde_derive v1.0.188 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking noodles-bam v0.46.0 [INFO] [stderr] Checking regex v1.9.5 [INFO] [stderr] Checking noodles-cram v0.43.0 [INFO] [stderr] Checking noodles v0.52.0 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking serde_yaml v0.9.25 [INFO] [stderr] Checking fasta_manipulation v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `x` [INFO] [stdout] --> src/map_headers.rs:48:13 [INFO] [stdout] | [INFO] [stdout] 48 | for x in name_vec { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_x` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:90:21 [INFO] [stdout] | [INFO] [stdout] 90 | let mut to_replace = l.replace('>', ""); [INFO] [stdout] | ----^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:93:21 [INFO] [stdout] | [INFO] [stdout] 93 | let mut map: Option<(String, String)> = [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:95:21 [INFO] [stdout] | [INFO] [stdout] 95 | let mut new_head: String = map.expect("").1; [INFO] [stdout] | ----^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:99:21 [INFO] [stdout] | [INFO] [stdout] 99 | let mut seq = line.expect(""); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `x` [INFO] [stdout] --> src/map_headers.rs:48:13 [INFO] [stdout] | [INFO] [stdout] 48 | for x in name_vec { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_x` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:90:21 [INFO] [stdout] | [INFO] [stdout] 90 | let mut to_replace = l.replace('>', ""); [INFO] [stdout] | ----^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:93:21 [INFO] [stdout] | [INFO] [stdout] 93 | let mut map: Option<(String, String)> = [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:95:21 [INFO] [stdout] | [INFO] [stdout] 95 | let mut new_head: String = map.expect("").1; [INFO] [stdout] | ----^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:99:21 [INFO] [stdout] | [INFO] [stdout] 99 | let mut seq = line.expect(""); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 22.38s [INFO] running `Command { std: "docker" "inspect" "fe53e45de859aa11de348db2f898f1dc7c3994476131103113975ece6b86f50e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fe53e45de859aa11de348db2f898f1dc7c3994476131103113975ece6b86f50e", kill_on_drop: false }` [INFO] [stdout] fe53e45de859aa11de348db2f898f1dc7c3994476131103113975ece6b86f50e [INFO] checking DLBPointon/FastaManipulator against try#645bb72776a6a56a1a8f52631a44bd082b2ba509 for absurd-question-mark-desugar [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/DLBPointon/FastaManipulator on toolchain 645bb72776a6a56a1a8f52631a44bd082b2ba509 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/DLBPointon/FastaManipulator [INFO] finished tweaking git repo https://github.com/DLBPointon/FastaManipulator [INFO] tweaked toml for git repo https://github.com/DLBPointon/FastaManipulator written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/DLBPointon/FastaManipulator already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8764588ab0e4b4dbc188fcfc89ad04c31da88e1e8b10887581656a1e7d662377 [INFO] running `Command { std: "docker" "start" "-a" "8764588ab0e4b4dbc188fcfc89ad04c31da88e1e8b10887581656a1e7d662377", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8764588ab0e4b4dbc188fcfc89ad04c31da88e1e8b10887581656a1e7d662377", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8764588ab0e4b4dbc188fcfc89ad04c31da88e1e8b10887581656a1e7d662377", kill_on_drop: false }` [INFO] [stdout] 8764588ab0e4b4dbc188fcfc89ad04c31da88e1e8b10887581656a1e7d662377 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+645bb72776a6a56a1a8f52631a44bd082b2ba509" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a66d80161a3eef276e199c9bbb1117990bfed7591e6aeadc31655f4a40f5d523 [INFO] running `Command { std: "docker" "start" "-a" "a66d80161a3eef276e199c9bbb1117990bfed7591e6aeadc31655f4a40f5d523", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.148 [INFO] [stderr] Compiling pkg-config v0.3.27 [INFO] [stderr] Compiling crossbeam-utils v0.8.16 [INFO] [stderr] Checking memchr v2.6.3 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling proc-macro2 v1.0.67 [INFO] [stderr] Checking hashbrown v0.14.0 [INFO] [stderr] Checking bitflags v2.4.0 [INFO] [stderr] Checking lexical-util v0.8.5 [INFO] [stderr] Checking noodles-core v0.12.0 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Compiling serde v1.0.188 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Compiling rustix v0.38.15 [INFO] [stderr] Checking miniz_oxide v0.7.1 [INFO] [stderr] Checking anstyle-parse v0.2.1 [INFO] [stderr] Checking anstyle-query v1.0.0 [INFO] [stderr] Checking anstyle v1.0.3 [INFO] [stderr] Checking linux-raw-sys v0.4.8 [INFO] [stderr] Checking colorchoice v1.0.0 [INFO] [stderr] Checking md-5 v0.10.6 [INFO] [stderr] Checking clap_lex v0.5.1 [INFO] [stderr] Checking anstream v0.5.0 [INFO] [stderr] Checking regex-syntax v0.7.5 [INFO] [stderr] Checking itoa v1.0.9 [INFO] [stderr] Checking ryu v1.0.15 [INFO] [stderr] Checking strsim v0.10.0 [INFO] [stderr] Checking unsafe-libyaml v0.2.9 [INFO] [stderr] Checking aho-corasick v1.1.1 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking flate2 v1.0.27 [INFO] [stderr] Checking indexmap v2.0.0 [INFO] [stderr] Checking clap_builder v4.4.4 [INFO] [stderr] Checking lexical-parse-integer v0.8.6 [INFO] [stderr] Checking lexical-write-integer v0.8.5 [INFO] [stderr] Checking crossbeam-channel v0.5.8 [INFO] [stderr] Compiling quote v1.0.33 [INFO] [stderr] Checking lexical-parse-float v0.8.5 [INFO] [stderr] Checking lexical-write-float v0.8.5 [INFO] [stderr] Compiling cc v1.0.83 [INFO] [stderr] Compiling syn v2.0.37 [INFO] [stderr] Checking is-terminal v0.4.9 [INFO] [stderr] Checking noodles-bgzf v0.24.0 [INFO] [stderr] Checking colored v2.0.4 [INFO] [stderr] Checking lexical-core v0.8.5 [INFO] [stderr] Checking noodles-csi v0.24.0 [INFO] [stderr] Checking noodles-fasta v0.29.0 [INFO] [stderr] Checking noodles-sam v0.43.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Checking clap v4.4.4 [INFO] [stderr] Checking regex-automata v0.3.8 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Compiling serde_derive v1.0.188 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking noodles-bam v0.46.0 [INFO] [stderr] Checking noodles-cram v0.43.0 [INFO] [stderr] Checking regex v1.9.5 [INFO] [stderr] Checking noodles v0.52.0 [INFO] [stderr] Checking serde_yaml v0.9.25 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking fasta_manipulation v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `x` [INFO] [stdout] --> src/map_headers.rs:48:13 [INFO] [stdout] | [INFO] [stdout] 48 | for x in name_vec { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_x` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:90:21 [INFO] [stdout] | [INFO] [stdout] 90 | let mut to_replace = l.replace('>', ""); [INFO] [stdout] | ----^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:93:21 [INFO] [stdout] | [INFO] [stdout] 93 | let mut map: Option<(String, String)> = [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:95:21 [INFO] [stdout] | [INFO] [stdout] 95 | let mut new_head: String = map.expect("").1; [INFO] [stdout] | ----^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:99:21 [INFO] [stdout] | [INFO] [stdout] 99 | let mut seq = line.expect(""); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `x` [INFO] [stdout] --> src/map_headers.rs:48:13 [INFO] [stdout] | [INFO] [stdout] 48 | for x in name_vec { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_x` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:90:21 [INFO] [stdout] | [INFO] [stdout] 90 | let mut to_replace = l.replace('>', ""); [INFO] [stdout] | ----^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:93:21 [INFO] [stdout] | [INFO] [stdout] 93 | let mut map: Option<(String, String)> = [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:95:21 [INFO] [stdout] | [INFO] [stdout] 95 | let mut new_head: String = map.expect("").1; [INFO] [stdout] | ----^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/map_headers.rs:99:21 [INFO] [stdout] | [INFO] [stdout] 99 | let mut seq = line.expect(""); [INFO] [stdout] | ----^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 5 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 14.50s [INFO] running `Command { std: "docker" "inspect" "a66d80161a3eef276e199c9bbb1117990bfed7591e6aeadc31655f4a40f5d523", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a66d80161a3eef276e199c9bbb1117990bfed7591e6aeadc31655f4a40f5d523", kill_on_drop: false }` [INFO] [stdout] a66d80161a3eef276e199c9bbb1117990bfed7591e6aeadc31655f4a40f5d523