[INFO] cloning repository https://github.com/tolkit/vcf2msa
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/tolkit/vcf2msa" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftolkit%2Fvcf2msa", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftolkit%2Fvcf2msa'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 809cb881b4b4e942de5fb7765cd6b7da8e05505d
[INFO] checking tolkit/vcf2msa against master#4c60a0ea5b2385d7400df9db1ad04e96f2a4c154 for 92191_revert
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftolkit%2Fvcf2msa" "/workspace/builds/worker-45/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-45/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/tolkit/vcf2msa on toolchain 4c60a0ea5b2385d7400df9db1ad04e96f2a4c154
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/tolkit/vcf2msa
[INFO] finished tweaking git repo https://github.com/tolkit/vcf2msa
[INFO] tweaked toml for git repo https://github.com/tolkit/vcf2msa written to /workspace/builds/worker-45/source/Cargo.toml
[INFO] crate git repo https://github.com/tolkit/vcf2msa already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pkg-config v0.3.20
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded bio v0.37.1
[INFO] [stderr]   Downloaded syn v1.0.77
[INFO] [stderr]   Downloaded rust-htslib v0.37.0
[INFO] [stderr]   Downloaded hts-sys v1.11.1-fix2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-45/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-45/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 67c42e2e87f2d4cf98ae6bc97fc5846100cf5e905b2bf97e18ef96c5901ed435
[INFO] running `Command { std: "docker" "start" "-a" "67c42e2e87f2d4cf98ae6bc97fc5846100cf5e905b2bf97e18ef96c5901ed435", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "67c42e2e87f2d4cf98ae6bc97fc5846100cf5e905b2bf97e18ef96c5901ed435", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "67c42e2e87f2d4cf98ae6bc97fc5846100cf5e905b2bf97e18ef96c5901ed435", kill_on_drop: false }`
[INFO] [stdout] 67c42e2e87f2d4cf98ae6bc97fc5846100cf5e905b2bf97e18ef96c5901ed435
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-45/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-45/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c6854f3373f321744a72041815021829e0db3366a8098ac22fc3f02167249b9a
[INFO] running `Command { std: "docker" "start" "-a" "c6854f3373f321744a72041815021829e0db3366a8098ac22fc3f02167249b9a", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling proc-macro2 v1.0.29
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling syn v1.0.77
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling libc v0.2.103
[INFO] [stderr]    Compiling libm v0.2.1
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling serde_derive v1.0.130
[INFO] [stderr]    Compiling serde v1.0.130
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling version_check v0.9.3
[INFO] [stderr]    Compiling unicode-segmentation v1.8.0
[INFO] [stderr]    Compiling pkg-config v0.3.20
[INFO] [stderr]     Checking ppv-lite86 v0.2.10
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling typenum v1.14.0
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]    Compiling paste v1.0.5
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]     Checking matches v0.1.9
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]     Checking regex-syntax v0.6.25
[INFO] [stderr]    Compiling anyhow v1.0.44
[INFO] [stderr]     Checking regex-automata v0.1.10
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]     Checking byteorder v1.4.3
[INFO] [stderr]     Checking unicode-bidi v0.3.6
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]     Checking unicode-width v0.1.9
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking itoa v0.4.8
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking fixedbitset v0.2.0
[INFO] [stderr]    Compiling bio v0.37.1
[INFO] [stderr]     Checking bytecount v0.6.2
[INFO] [stderr]     Checking bitflags v1.3.2
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking strsim v0.8.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking strum v0.21.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking fnv v1.0.7
[INFO] [stderr]     Checking tinyvec v1.5.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking itertools v0.10.1
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling num-traits v0.2.14
[INFO] [stderr]    Compiling num-integer v0.1.44
[INFO] [stderr]    Compiling num-rational v0.4.0
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]     Checking form_urlencoded v1.0.1
[INFO] [stderr]     Checking matrixmultiply v0.3.1
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]     Checking bit-set v0.5.2
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr] error: could not compile `regex-syntax`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name regex_syntax --edition=2018 /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/regex-syntax-0.6.25/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="default"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' -C metadata=b65cedb3bd8cf729 -C extra-filename=-b65cedb3bd8cf729 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `itertools`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `rustc --crate-name itertools --edition=2018 /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/itertools-0.10.1/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --cfg 'feature="default"' --cfg 'feature="use_alloc"' --cfg 'feature="use_std"' -C metadata=3f1d276040a57964 -C extra-filename=-3f1d276040a57964 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern either=/opt/rustwide/target/debug/deps/libeither-2e2e5d9f01684535.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "c6854f3373f321744a72041815021829e0db3366a8098ac22fc3f02167249b9a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c6854f3373f321744a72041815021829e0db3366a8098ac22fc3f02167249b9a", kill_on_drop: false }`
[INFO] [stdout] c6854f3373f321744a72041815021829e0db3366a8098ac22fc3f02167249b9a