[INFO] cloning repository https://github.com/bluenote-1577/chrom_mini_graph [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/bluenote-1577/chrom_mini_graph" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fchrom_mini_graph", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fchrom_mini_graph'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 71d07245d49fd653f757462978ae1cc65537ef94 [INFO] checking bluenote-1577/chrom_mini_graph against master#4c60a0ea5b2385d7400df9db1ad04e96f2a4c154 for 92191_revert [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbluenote-1577%2Fchrom_mini_graph" "/workspace/builds/worker-5/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/bluenote-1577/chrom_mini_graph on toolchain 4c60a0ea5b2385d7400df9db1ad04e96f2a4c154 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/bluenote-1577/chrom_mini_graph [INFO] finished tweaking git repo https://github.com/bluenote-1577/chrom_mini_graph [INFO] tweaked toml for git repo https://github.com/bluenote-1577/chrom_mini_graph written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate git repo https://github.com/bluenote-1577/chrom_mini_graph already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 98b390b64c4321d8fe3a6e7c27521f3626b3c537dbfe741503060204ee6e72b1 [INFO] running `Command { std: "docker" "start" "-a" "98b390b64c4321d8fe3a6e7c27521f3626b3c537dbfe741503060204ee6e72b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "98b390b64c4321d8fe3a6e7c27521f3626b3c537dbfe741503060204ee6e72b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "98b390b64c4321d8fe3a6e7c27521f3626b3c537dbfe741503060204ee6e72b1", kill_on_drop: false }` [INFO] [stdout] 98b390b64c4321d8fe3a6e7c27521f3626b3c537dbfe741503060204ee6e72b1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d190cb871061d98bc6d0581d85cb2ecb09a0f8a142ba5463de30be9999fc3251" "/opt/rustwide/cargo-home/bin/cargo" "+4c60a0ea5b2385d7400df9db1ad04e96f2a4c154" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 64cce2e118cc18b537c6bc3adc10356f80d36b2037aa26baf3874822ac50085c [INFO] running `Command { std: "docker" "start" "-a" "64cce2e118cc18b537c6bc3adc10356f80d36b2037aa26baf3874822ac50085c", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling libc v0.2.102 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling proc-macro2 v1.0.29 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling syn v1.0.76 [INFO] [stderr] Compiling serde v1.0.130 [INFO] [stderr] Compiling serde_derive v1.0.130 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling memchr v2.4.1 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling pkg-config v0.3.22 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling unicode-segmentation v1.8.0 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.5 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling serde_json v1.0.68 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling crossbeam-epoch v0.9.5 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rayon-core v1.9.1 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Compiling cbindgen v0.20.0 [INFO] [stderr] Compiling hashbrown v0.11.2 [INFO] [stderr] Compiling itoa v0.4.8 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling bindgen v0.53.3 [INFO] [stderr] Compiling remove_dir_all v0.5.3 [INFO] [stderr] Checking tinyvec_macros v0.1.0 [INFO] [stderr] Compiling typenum v1.14.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling paste v1.0.5 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Checking matches v0.1.9 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling anyhow v1.0.44 [INFO] [stderr] Compiling linfa v0.5.0 [INFO] [stderr] Checking regex-automata v0.1.10 [INFO] [stderr] Checking unicode-bidi v0.3.7 [INFO] [stderr] Checking percent-encoding v2.1.0 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Checking byteorder v1.4.3 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Compiling bio v0.37.1 [INFO] [stderr] Checking strum v0.21.0 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking random v0.12.2 [INFO] [stderr] Checking bytecount v0.6.2 [INFO] [stderr] Checking fnv v1.0.7 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking disjoint-sets v0.4.2 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Compiling walkdir v2.3.2 [INFO] [stderr] Checking matrixmultiply v0.3.1 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling indexmap v1.7.0 [INFO] [stderr] Compiling memoffset v0.6.4 [INFO] [stderr] Compiling num-bigint v0.3.3 [INFO] [stderr] Compiling num-rational v0.4.0 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling rayon v1.5.1 [INFO] [stderr] Checking itertools v0.10.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking tinyvec v1.5.0 [INFO] [stderr] Compiling clang-sys v0.29.3 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking form_urlencoded v1.0.1 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Checking unicode-normalization v0.1.19 [INFO] [stderr] Checking getrandom v0.2.3 [INFO] [stderr] Checking lapack-sys v0.12.1 [INFO] [stderr] Checking cblas-sys v0.1.4 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking special v0.8.1 [INFO] [stderr] Compiling jobserver v0.1.24 [INFO] [stderr] Compiling dirs-sys v0.3.6 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Checking crossbeam-deque v0.8.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking probability v0.17.0 [INFO] [stderr] Compiling dirs v3.0.2 [INFO] [stderr] Compiling cc v1.0.71 [INFO] [stderr] Checking regex v1.5.4 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking wyhash v0.5.0 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking approx v0.4.0 [INFO] [stderr] Checking approx v0.5.0 [INFO] [stderr] Checking num-complex v0.3.1 [INFO] [stderr] Checking ordered-float v1.1.1 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking rand v0.8.4 [INFO] [stderr] Checking idna v0.2.3 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling cmake v0.1.46 [INFO] [stderr] Compiling openssl-src v300.0.2+3.0.0 [INFO] [stderr] Checking url v2.2.2 [INFO] [stderr] Checking rand_distr v0.4.2 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking rand_distr v0.3.0 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling openssl-sys v0.9.70 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling curl-sys v0.4.50+curl-7.79.1 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling hts-sys v2.0.2 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling tempfile v3.2.0 [INFO] [stderr] Checking num v0.3.1 [INFO] [stderr] Compiling thiserror-impl v1.0.29 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling getset v0.1.1 [INFO] [stderr] Compiling strum_macros v0.21.1 [INFO] [stderr] Checking enum-map v1.1.1 [INFO] [stderr] Checking thiserror v1.0.29 [INFO] [stderr] Compiling openblas-build v0.1.1 [INFO] [stderr] Checking bio-types v0.12.0 [INFO] [stderr] Compiling openblas-src v0.10.4 [INFO] [stderr] Checking num-complex v0.4.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking bstr v0.2.17 [INFO] [stderr] Checking multimap v0.8.3 [INFO] [stderr] Checking smallvec v1.6.1 [INFO] [stderr] Checking boomphf v0.5.9 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking smartcore v0.2.0 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Compiling toml v0.5.8 [INFO] [stderr] Checking ndarray v0.15.3 [INFO] [stderr] Checking lapack v0.18.0 [INFO] [stderr] Checking cauchy v0.4.0 [INFO] [stderr] Checking simba v0.5.1 [INFO] [stderr] Checking csv v1.1.6 [INFO] [stderr] Checking debruijn v0.3.4 [INFO] [stderr] Checking lax v0.2.0 [INFO] [stderr] Checking ndarray-linalg v0.14.1 [INFO] [stderr] Checking nalgebra v0.27.1 [INFO] [stderr] Compiling block-aligner v0.2.0 [INFO] [stderr] Compiling libwfa v0.1.2 [ERROR] error running command: command timed out after 900 seconds [INFO] running `Command { std: "docker" "inspect" "64cce2e118cc18b537c6bc3adc10356f80d36b2037aa26baf3874822ac50085c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "64cce2e118cc18b537c6bc3adc10356f80d36b2037aa26baf3874822ac50085c", kill_on_drop: false }` [INFO] [stdout] 64cce2e118cc18b537c6bc3adc10356f80d36b2037aa26baf3874822ac50085c