[INFO] cloning repository https://github.com/COMBINE-lab/piscem
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/COMBINE-lab/piscem" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCOMBINE-lab%2Fpiscem", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCOMBINE-lab%2Fpiscem'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3dcc7c3e956b53f599986b5f8513a9131a9f565b
[INFO] checking COMBINE-lab/piscem against master#08cd08fbef8c6663b052d8d9e4930d5696cbb8a7 for 150662-leaf
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCOMBINE-lab%2Fpiscem" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-3-tc1/source/.cargo/config.toml
[INFO] started tweaking git repo https://github.com/COMBINE-lab/piscem
[INFO] finished tweaking git repo https://github.com/COMBINE-lab/piscem
[INFO] tweaked toml for git repo https://github.com/COMBINE-lab/piscem written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/COMBINE-lab/piscem on toolchain 08cd08fbef8c6663b052d8d9e4930d5696cbb8a7
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+08cd08fbef8c6663b052d8d9e4930d5696cbb8a7" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/COMBINE-lab/piscem already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+08cd08fbef8c6663b052d8d9e4930d5696cbb8a7" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded path-tools v0.1.0
[INFO] [stderr]   Downloaded prepare_fasta v0.2.0
[INFO] [stderr]   Downloaded liblzma v0.3.6
[INFO] [stderr]   Downloaded sha2-asm v0.6.4
[INFO] [stderr]   Downloaded value-traits-derive v0.2.1
[INFO] [stderr]   Downloaded thread-priority v3.0.0
[INFO] [stderr]   Downloaded ensure_simd v0.1.0
[INFO] [stderr]   Downloaded cf1-rs v0.3.1
[INFO] [stderr]   Downloaded dyn_size_of v0.4.5
[INFO] [stderr]   Downloaded binout v0.3.1
[INFO] [stderr]   Downloaded seq-hash v0.1.2
[INFO] [stderr]   Downloaded arbitrary-chunks v0.4.1
[INFO] [stderr]   Downloaded simd-minimizers v2.3.1
[INFO] [stderr]   Downloaded mem_dbg v0.3.4
[INFO] [stderr]   Downloaded packed-seq v4.4.2
[INFO] [stderr]   Downloaded ph v0.11.0
[INFO] [stderr]   Downloaded sshash-lib v0.4.0
[INFO] [stderr]   Downloaded paraseq v0.4.8
[INFO] [stderr]   Downloaded epserde v0.12.4
[INFO] [stderr]   Downloaded chumsky v0.12.0
[INFO] [stderr]   Downloaded lender v0.6.2
[INFO] [stderr]   Downloaded sysinfo v0.35.2
[INFO] [stderr]   Downloaded voracious_radix_sort v1.2.0
[INFO] [stderr]   Downloaded needletail v0.6.3
[INFO] [stderr]   Downloaded piscem-rs v0.3.1
[INFO] [stderr]   Downloaded ph-temp v0.12.0
[INFO] [stderr]   Downloaded rapidhash v4.4.1
[INFO] [stderr]   Downloaded sux v0.13.1
[INFO] [stderr]   Downloaded niffler v3.0.0
[INFO] [stderr]   Downloaded atomic-primitive v0.1.3
[INFO] [stderr]   Downloaded lambert_w v1.2.34
[INFO] [stderr]   Downloaded mem_dbg v0.4.0
[INFO] [stderr]   Downloaded rdst v0.20.14
[INFO] [stderr]   Downloaded ariadne v0.5.1
[INFO] [stderr]   Downloaded bitm v0.5.2
[INFO] [stderr]   Downloaded rapidhash v1.4.0
[INFO] [stderr]   Downloaded ambassador v0.5.0
[INFO] [stderr]   Downloaded dsi-progress-logger v0.8.2
[INFO] [stderr]   Downloaded impl-tools-lib v0.11.4
[INFO] [stderr]   Downloaded impl-tools v0.11.4
[INFO] [stderr]   Downloaded maybe-dangling v0.1.2
[INFO] [stderr]   Downloaded mmap-rs v0.7.0
[INFO] [stderr]   Downloaded value-traits v0.2.1
[INFO] [stderr]   Downloaded epserde-derive v0.12.4
[INFO] [stderr]   Downloaded mem_dbg-derive v0.3.0
[INFO] [stderr]   Downloaded seq_geom_parser v1.1.0
[INFO] [stderr]   Downloaded liblzma-sys v0.3.13
[INFO] [stderr]   Downloaded num-primitive v0.2.1
[INFO] [stderr]   Downloaded buffer-redux v1.1.0
[INFO] [stderr]   Downloaded chiapos-chacha8 v0.1.0
[INFO] [stderr]   Downloaded seedable_hash v0.2.3
[INFO] [stderr]   Downloaded derive_setters v0.1.9
[INFO] [stderr]   Downloaded lender-derive v0.1.3
[INFO] [stderr]   Downloaded nanorand v0.6.1
[INFO] [stderr]   Downloaded block-pseudorand v0.1.2
[INFO] [stderr]   Downloaded mem_dbg-derive v0.2.1
[INFO] [stderr]   Downloaded stable_try_trait_v2 v1.75.1
[INFO] [stderr]   Downloaded partition v0.1.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+08cd08fbef8c6663b052d8d9e4930d5696cbb8a7" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7d4a881e1ceddca318636fc845f84e6e7cdbe7129ff0082a48ddaed2a619c5b3
[INFO] running `Command { std: "docker" "start" "-a" "7d4a881e1ceddca318636fc845f84e6e7cdbe7129ff0082a48ddaed2a619c5b3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7d4a881e1ceddca318636fc845f84e6e7cdbe7129ff0082a48ddaed2a619c5b3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7d4a881e1ceddca318636fc845f84e6e7cdbe7129ff0082a48ddaed2a619c5b3", kill_on_drop: false }`
[INFO] [stdout] 7d4a881e1ceddca318636fc845f84e6e7cdbe7129ff0082a48ddaed2a619c5b3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+08cd08fbef8c6663b052d8d9e4930d5696cbb8a7" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a3e9760b1bb8073caee9faf0e33ef6d46b8a9d5c1cda018a97dad80d61409827
[INFO] running `Command { std: "docker" "start" "-a" "a3e9760b1bb8073caee9faf0e33ef6d46b8a9d5c1cda018a97dad80d61409827", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.183
[INFO] [stderr]     Checking regex-automata v0.4.14
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]     Checking zlib-rs v0.6.3
[INFO] [stderr]    Compiling object v0.37.3
[INFO] [stderr]    Compiling zerocopy-derive v0.8.47
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling nix v0.30.1
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]     Checking itoa v1.0.18
[INFO] [stderr]    Compiling enum-as-inner v0.6.1
[INFO] [stderr]    Compiling getrandom v0.4.2
[INFO] [stderr]     Checking rand_core v0.10.0
[INFO] [stderr]     Checking wyhash v0.5.0
[INFO] [stderr]    Compiling darling_core v0.21.3
[INFO] [stderr]     Checking combine v4.6.7
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]     Checking tracing-core v0.1.36
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]     Checking dyn_size_of v0.4.5
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking bytemuck v1.25.0
[INFO] [stderr]     Checking rapidhash v1.4.0
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]     Checking bitm v0.5.2
[INFO] [stderr]     Checking seedable_hash v0.2.3
[INFO] [stderr]     Checking anstream v0.6.21
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]     Checking flate2 v1.1.9
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling mem_dbg-derive v0.3.0
[INFO] [stderr]    Compiling darling_core v0.23.0
[INFO] [stderr]    Compiling cc v1.2.57
[INFO] [stderr]    Compiling tracing-attributes v0.1.31
[INFO] [stderr]    Compiling mem_dbg-derive v0.2.1
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking buffer-redux v1.1.0
[INFO] [stderr]     Checking binout v0.3.1
[INFO] [stderr]     Checking jiff v0.2.23
[INFO] [stderr]     Checking cpufeatures v0.3.0
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]    Compiling prettyplease v0.2.37
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]     Checking chacha20 v0.10.0
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking zerocopy v0.8.47
[INFO] [stderr]     Checking mem_dbg v0.3.4
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking tracing v0.1.44
[INFO] [stderr]    Compiling impl-tools-lib v0.11.4
[INFO] [stderr] error: could not compile `regex-automata` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/08cd08fbef8c6663b052d8d9e4930d5696cbb8a7/bin/rustc --crate-name regex_automata --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/regex-automata-0.4.14/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata -C embed-bitcode=no -C debuginfo=2 --allow=unexpected_cfgs --check-cfg 'cfg(docsrs_regex)' --cfg 'feature="alloc"' --cfg 'feature="dfa-build"' --cfg 'feature="dfa-onepass"' --cfg 'feature="dfa-search"' --cfg 'feature="hybrid"' --cfg 'feature="meta"' --cfg 'feature="nfa-backtrack"' --cfg 'feature="nfa-pikevm"' --cfg 'feature="nfa-thompson"' --cfg 'feature="perf-inline"' --cfg 'feature="perf-literal"' --cfg 'feature="perf-literal-multisubstring"' --cfg 'feature="perf-literal-substring"' --cfg 'feature="std"' --cfg 'feature="syntax"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' --cfg 'feature="unicode-word-boundary"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("alloc", "default", "dfa", "dfa-build", "dfa-onepass", "dfa-search", "hybrid", "internal-instrument", "internal-instrument-pikevm", "logging", "meta", "nfa", "nfa-backtrack", "nfa-pikevm", "nfa-thompson", "perf", "perf-inline", "perf-literal", "perf-literal-multisubstring", "perf-literal-substring", "std", "syntax", "unicode", "unicode-age", "unicode-bool", "unicode-case", "unicode-gencat", "unicode-perl", "unicode-script", "unicode-segment", "unicode-word-boundary"))' -C metadata=d3cdd7eb56ee2c56 -C extra-filename=-6667c51cedd9f39f --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern aho_corasick=/opt/rustwide/target/debug/deps/libaho_corasick-0fb197dd6545f795.rmeta --extern memchr=/opt/rustwide/target/debug/deps/libmemchr-3d944e3b9ac373a3.rmeta --extern regex_syntax=/opt/rustwide/target/debug/deps/libregex_syntax-6cb68f2e111607e3.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "a3e9760b1bb8073caee9faf0e33ef6d46b8a9d5c1cda018a97dad80d61409827", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a3e9760b1bb8073caee9faf0e33ef6d46b8a9d5c1cda018a97dad80d61409827", kill_on_drop: false }`
[INFO] [stdout] a3e9760b1bb8073caee9faf0e33ef6d46b8a9d5c1cda018a97dad80d61409827